Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3550g00010 ATGGAATGGATCATAGGTGTGTGTGTTGTGATGGGCATGTTGTTGATGAGTTGGTGGATTCTACTATATGGGAAGAATGATGAGAAGACGATGGGAAAAGGCAAAGTCCCAAAAGGAAACTCTGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATAGCTTCTGGCTACACTTCGTCTCCTGTCACCTTCTTGGAAAAACGAAAGTCTTTGTACGGGAATGTGTTCAAGACATGCATTTTGGGGAGCAATGTCATAATATCGACTGACCCGGACGTCAACAAGGTGGTTCTGCAAAACCACCAAGGCAACTTCGTCCCTGCTTATCCAAAATCAATTAGAGAATTGATGGGAGAACAATCCATACTCAAAATGAACGGGACCATGCATAAGAAAGTGCACACTCTCATCGCAGGGTTCCTCCGATCCCCACATTTTAAAGCTCGAATCACCAGAGACATTGAACAGGCTGTCAAACAATGCTTGGCATCTTGGACTTCCCACCAACCAATATACGTTCAAGATCAAGTCAAAAGGATTACATTTCCTGTTTTGGTCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGAATTGGACTTCCTGTATAGAGAGTTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCCCTCAAATTTCCCGGAACAAGACTATATAAATCCTTGAAGTCGAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAGCTAAGGATAGATAATGGTGCAGATGACGAAGGTGATGCAGTGAATGATGTACTGGAGGCACTGTTACAAGATAAGGGTGACTCCAGCTCAAGCGCACGCCTGAGTCCAGACATGATTAGCCAAAACATCATAGAGATGATGATACCGGGGGAGGAAACACTTCCTACAGCTATGACCATGGCCCTCAAATTCCTCAGTGACTCTCCTATCGCTCTATCTAAACTTAAGGAGGAGAACATGGAACTGAAGAGACTAAAGACTAATTGCTCAGAAGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTCAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCGCTCAATGACATAGAAATTAAAGGGTACCTGATTCCGAAGGACTGGTGTGTCATGGCATCTCTTACCTCGGTTCACATGGACGAGAAGAACTATGAAAACCCTTTTAAATTCGATCCATGCAGATGGGAGAAAATTGGAGCTGTGGCTGGTTGCAACAGCTTTGCCCCATTTGGGCGGTGGGAAAATAGACTGTGTCCTGGATTAGAACTCTCCAGGCTCGAGCTCTCTATTTTCCTTCCTCATCTTGTTACTACTTACAGGTGGGTGGCTGAGAGGGATGAAATCCTCTACTTTCCAACTGTGAAGATGAAGAGGAAGCTCCCAATTTTCGTGCAACCCATTAGCGCTTGA 1467 0.441 MEWIIGVCVVMGMLLMSWWILLYGKNDEKTMGKGKVPKGNSGWPLLGETLDFIASGYTSSPVTFLEKRKSLYGNVFKTCILGSNVIISTDPDVNKVVLQNHQGNFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPHFKARITRDIEQAVKQCLASWTSHQPIYVQDQVKRITFPVLVKVLMSVGPGEELDFLYREFAEFIKGLICLPLKFPGTRLYKSLKSKDRMVKMVRKIVEERKKLRIDNGADDEGDAVNDVLEALLQDKGDSSSSARLSPDMISQNIIEMMIPGEETLPTAMTMALKFLSDSPIALSKLKEENMELKRLKTNCSEDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSLNDIEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPCRWEKIGAVAGCNSFAPFGRWENRLCPGLELSRLELSIFLPHLVTTYRWVAERDEILYFPTVKMKRKLPIFVQPISA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3550g00010 488 PRINTS E-class P450 group IV signature 348 364 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 PRINTS E-class P450 group IV signature 397 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 PRINTS E-class P450 group IV signature 437 455 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 Pfam Cytochrome P450 37 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 CDD CYP90-like 68 485 - -
Vium3550g00010 488 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 26 486 - -
Vium3550g00010 488 SUPERFAMILY Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00010 488 Coils Coil 319 339 - -
Vium3550g00010 488 PANTHER CYTOCHROME P450 26 36 461 - -
Vium3550g00010 488 Gene3D Cytochrome P450 25 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3550g00010 Vium-Chr3550 112119 117799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3550g00010 36 380 Cytochrome P450 AT4G36380 63.478 6.20e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3550g00010 K12637 - gmx:100799030 864.374