Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium349g00016 ATGAAGCTCACAGATTTTCTCTTTGCACTGAAACCACTCTTTGCAACAGTAGTAGGTGTTATCTCAGTTGCTGTAATTACCAAAATCCTTGGTATTAGATTTTTCGACAAGAAAAGGAAGTACCATCCGGTTGCTGGCACAGTCATACACCAACTTTTCAACTTTACCAGACTCCTGGATTACATGATCGACCGTACAAACCACAGGAAAACTTATAGGTTGCTTAGCTTCAACAGAAGTGAGGTCTACACTGCAGACCCTGTTAATATTGAGTATTTCCTTGCCACAAATTTCTCAAACTACGGCAAGGGTTGGTATCACCATAGTGTCTTGTCAGATTTTCTTGGAGATAGTATATTCACGGTGGATGGGGAGCAATGGAGACATCAGAGAAAGACAGCAAGCTATCAATTCTCAACGAAAATGTTGAGAGACTACAGCAATTGGGCGTTCAAATCTAATGCACTAAAACTTGCAGAGATAGTGTCTGAAGCTGCAATCTCAGATAATATTATTGACATGCAGGAATTGTTCATGGAAGCTACTCTAGATTCTGTATGCAAGGTTATCTTGGGTGTTGATCTGGACACCATGCGTGGAACCTATAAAGAAGGCACGGAGTTTTCCAATGCGTTTGATGAAGCAAGTGCTGCTATCATGTACCGGTATTTTAACTATCTCTGGAGAATTATGCGGTTCTTTAACATTGGATCAGAAGCAGTTCTTAGGAAAAGTTTAAGTGTGATGGATGAATTCGTTTATGAACTAATCAGAAACAAGATGGAGCAAGCCCAAAAGCCACAAGATAATTTACCTGGGACGAAAGGAGACATGTTGTCAAGGTTTATAGAATTGAAAGAAACCGATCCAAAATACCTTAGAGACATTTCCTTGAGCTTTATCCTTGCAGGGAAAGATACAACAGCAATTACTCTTTCCTGGTTTTTTTATGAGATTTGCAAGAACTCTCACGTGCAGGAGAAGATTGAACAAGAAATTAGAGAGACAACAAATGTAGCAGCTGGGTCAACCATTGATGAACTTGCAGCTAGAGTAACTGAAGAGAACCTGGAAAAGATGCCGTACCTACATGCCTCATTGAATGAAACACTCAGGCTCCATCCAGCAGTTCCAGTGCAAGGTAAGTTTTGTTTCTCAGATGACACGTGGCCAGATGGATTTAGCGTGAGGAAAGGTGATCTTGTGTCATTCCAACCGTATGTTATGGGAAGGATGAAGTTCTTGTGGGGCGAAGATGCCGACAAATTCAGGCCAGAGAGATGGCTCGATGAGAATGGAATTTTGAAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTTCACGCGGGTCCAAGAATTTGCCTGGGGAAGGAGTTTGCATACAGACAGATGAAAGTATACTCTGCGCTCCTCTTAGGTAGTCACAGCTTCAAACTGGCAGACCAAAACAAACCAGTGAAATACAGAACAATGCTTACTCTACAAATTGAAGGTGGCCTACACGTTTATGCTTCTCGAAGAGAGTAA 1524 0.4147 MKLTDFLFALKPLFATVVGVISVAVITKILGIRFFDKKRKYHPVAGTVIHQLFNFTRLLDYMIDRTNHRKTYRLLSFNRSEVYTADPVNIEYFLATNFSNYGKGWYHHSVLSDFLGDSIFTVDGEQWRHQRKTASYQFSTKMLRDYSNWAFKSNALKLAEIVSEAAISDNIIDMQELFMEATLDSVCKVILGVDLDTMRGTYKEGTEFSNAFDEASAAIMYRYFNYLWRIMRFFNIGSEAVLRKSLSVMDEFVYELIRNKMEQAQKPQDNLPGTKGDMLSRFIELKETDPKYLRDISLSFILAGKDTTAITLSWFFYEICKNSHVQEKIEQEIRETTNVAAGSTIDELAARVTEENLEKMPYLHASLNETLRLHPAVPVQGKFCFSDDTWPDGFSVRKGDLVSFQPYVMGRMKFLWGEDADKFRPERWLDENGILKKESPFKFTAFHAGPRICLGKEFAYRQMKVYSALLLGSHSFKLADQNKPVKYRTMLTLQIEGGLHVYASRRE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium349g00016 507 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 Gene3D Cytochrome P450 9 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PANTHER CYTOCHROME P450 29 501 - -
Vium349g00016 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vium349g00016 507 PRINTS E-class P450 group IV signature 453 471 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS E-class P450 group IV signature 294 320 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS E-class P450 group IV signature 360 376 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 PRINTS E-class P450 group IV signature 394 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium349g00016 507 CDD CYP86A 70 499 - -
Vium349g00016 507 Pfam Cytochrome P450 71 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium349g00016 Vium-Chr349 143869 147308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium349g00016 20 506 Cytochrome P450 AT2G45510 48.893 2.14e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium349g00016 - - pvu:PHAVU_007G063800g 915.22