Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium349g00006 ATGACACTGCACACAGTGTTTACTGCGGTCTCAGTGTATCTGATTCTCGTCCATGCATCAATGCTTGCTAACTCAGCCATGGATCCCTACAAAGCCCTCAACATCATCCTCAACCCAAACGGCACCCTCACACGCTTAAGCATTTCGCCGCAAAGCCCTCCCTCGCCGGATCCCTCGCTCCCCACACCGGTTCTCTCCAAAGACCTCCCCATCAACAAATTCAACCACACCTGGGCGCGGATCTACCTACCCCACAAATCACTCCATCATTCCCCCAACCCCAAACTACCCCTCATCGTCTTCTACCACGGCGGAGGCTTCATCTTCGAAAGTGCAGCCTCCACTTACTTCCACGACTTCTGCGTCAGAATGGCCCACACCACGCAGTCCGTCGTGGTTTCGGTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCCTACGAAGACTCCGTGGAGGCGCTGCACTGGATCAAAGCCTCCAACGACGCCTGGTTGCGCCACGCCGATTACTCCCGCTGCTATCTGATGGGGGAGAGTGCCGGGGGAAACATTGCCTACACGGCTGGTCTACGTGCGGCGGCGGAGGTTGGCAAGTTGAAACCGCTGAAGATTGCAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGAAGAAGAGGAGTCCATCAGAGATAAGGCTTGCCGAGGACAACACTATACCTTTGCCTATCACAGATCTGATGTGGAATCTGTCGCTGCCCGTTGGCGTTGACCGTGATTACCCGTATTCAAATCCAACTATCAACGGTGGAGATAAGATTTTGGATGAGCTTAAGGTTCTTGGTTGGAGGGTTGCGGTGTTTGGATGTGAAGGGGACCCACTGGTGGCCCGCGAGAGAGAGCTGGTGAAATTGCTTGAGCATAACGGTGTGAACGTGGTTGGAAAGTTTTATGAAGGGGGTCGACATGGCATCTTTGTCGGTGACCCTTCCATGTCCCTCCAAGTCTTTCGTTTACTTAAAACTCTTCATTAG 1017 0.5408 MTLHTVFTAVSVYLILVHASMLANSAMDPYKALNIILNPNGTLTRLSISPQSPPSPDPSLPTPVLSKDLPINKFNHTWARIYLPHKSLHHSPNPKLPLIVFYHGGGFIFESAASTYFHDFCVRMAHTTQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKASNDAWLRHADYSRCYLMGESAGGNIAYTAGLRAAAEVGKLKPLKIAGLILIQPFFGGKKRSPSEIRLAEDNTIPLPITDLMWNLSLPVGVDRDYPYSNPTINGGDKILDELKVLGWRVAVFGCEGDPLVARERELVKLLEHNGVNVVGKFYEGGRHGIFVGDPSMSLQVFRLLKTLH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium349g00006 338 PANTHER ARYLACETAMIDE DEACETYLASE 36 314 - -
Vium349g00006 338 Pfam alpha/beta hydrolase fold 99 320 IPR013094 GO:0016787
Vium349g00006 338 Gene3D alpha/beta hydrolase 30 336 IPR029058 -
Vium349g00006 338 SUPERFAMILY alpha/beta-Hydrolases 41 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium349g00006 Vium-Chr349 50272 51428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium349g00006 51 260 Carbohydrate Esterase AT1G68620 45.370 2.39e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium349g00006 - - var:108324928 666.381