Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3485g00005 ATGGGAGAACTGAAGCTACTGGGAGTTTGGCCTAGTTCATACGTTTACAGGATCATATGGGCGTTAGAACTGAAGGGCATAAAGTATGAGCATGTACAAGGAGAATTCCACAACCCTGATTTCAGTGATTTGCTACTGAAGTATAACCCAGTTTACAAAAAGGTTCCTGTCCTTGTTGTTGATGGAAAGCCAATTGCAGAATCCACTGTCATTCTTGAATACATAGAGGAAACATGGCCACAGCCACCCATGCTTCCACAGGACCCATATGAGAGGGCCGTGGCACGGTTTTGGAGTACTTCGTTTATGTCATTCTTTGTGGCTGTTGGAGAAGAGTTTCAGAAGGCAACAAAGGAAGTAAGAGAAGTGCTTAAAGTATTAGAAGAAACCATTGGGGACAAAAAGTATTTTGGTGGTGAAGAAATTGGAGTTTTGGACATAACCTTGGGATGGATACCCTTGTTCTTTGGAGTCATTGAAGATATTGTTGGTGTAAAGGTGTTGGTAGTTGATGATTTTCCTCGCTTGTTTACTTGGATTCGGAACTTCAGTGAGCACCCCTCTATCAGAACGAACTTTCCAAGTCACCATGAGTTGTTTGGTTATTACAAGCAAAAGAGAGACACTATTATTCCACCCAATACAGCATGA 651 0.4194 MGELKLLGVWPSSYVYRIIWALELKGIKYEHVQGEFHNPDFSDLLLKYNPVYKKVPVLVVDGKPIAESTVILEYIEETWPQPPMLPQDPYERAVARFWSTSFMSFFVAVGEEFQKATKEVREVLKVLEETIGDKKYFGGEEIGVLDITLGWIPLFFGVIEDIVGVKVLVVDDFPRLFTWIRNFSEHPSIRTNFPSHHELFGYYKQKRDTIIPPNTA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3485g00005 216 Gene3D Glutaredoxin 1 84 - -
Vium3485g00005 216 CDD GST_N_Tau 4 79 - -
Vium3485g00005 216 SFLD Main.3: Omega- and Tau-like 2 210 IPR045073 -
Vium3485g00005 216 Pfam Glutathione S-transferase, C-terminal domain 116 181 - -
Vium3485g00005 216 SFLD Glutathione Transferase (cytosolic) 2 210 IPR040079 -
Vium3485g00005 216 CDD GST_C_Tau 89 205 IPR045074 GO:0004364|GO:0006749
Vium3485g00005 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Vium3485g00005 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vium3485g00005 216 FunFam Tau class glutathione S-transferase 85 212 - -
Vium3485g00005 216 Gene3D - 85 213 - -
Vium3485g00005 216 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vium3485g00005 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 198 IPR045073 -
Vium3485g00005 216 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Vium3485g00005 216 SUPERFAMILY GST C-terminal domain-like 77 208 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3485g00005 Vium-Chr3485 57067 58302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3485g00005 3 210 Glutathione S-transferase Gene Family AT2G29420 40.278 9.06e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3485g00005 K00799 - gmx:100500361 380.563