Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3478g00010 ATGGTGGTTGCAGACATGGAAAGCTTAAAAACACCTTTTAAGGGTGTTATAAAGGATCTTCAAGGAAGAGCTTTGTTTTATAAAGATGATTGGACAACTGGTCTCTACTCAGGAACTAGAATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCGGTTATTGCTTTTGGGGAGCAGCTAAGTAGAGATACAGATGGAAGCTTGAGCACTGTAGAAACGCTGGCTTCTACAGCTATTTGTGGAATCATACACTCAATTTTGGGTGGCCAACCTCTCTTAATTGTAGGAGTTGCTGAGCCCACTATCATTATGTACACCTATTTGTACAACTTCGCCAAAGATAAGGATTCCTTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTATATGGACTGCTCTCTTGTTGTTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAAAAGATTTACAAGGATCGCGGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATAAAGGGAATTGTAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACATCGAAAAAGTACCATTTTGATTGGCTGTATGCAAATGGGTTGATGGGAATTATATTCTCCTTTGGCCTTCTCTATACGTCTTTAAAGAGTAGAAGAGCAAGGTCATGGTTATATGGCACAGGGTGGTTTAGAAGTTTTGTTGCAGACTATGGAGTACCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCATAGTACCAAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCACCTCTCCTCTTGTTTGGGAGTCTACATCTTTACATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCGTCATATATTTTTGCTGCTTTTATTCCCGCTATAATGATAGCAGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAAATGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTAATTGGCTTACCTCCTTCAAATGGAGTTCTTCCTCAATCTCCAATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGATGATACGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAATCTTAAAGCTAGCAATTCTGAAATTTATGGAAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTTAGTGGTCAAAGAATTAGAGGATTTGAAAGAGGTTGTCTTAAACGGTGAAGACAAAGGACATGACAACAAGAGTAACTTTGATCCTGAAAAACACATTGATAAATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTTGGAGCATCAGTCTTTGGCATGCCTGTCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCGTACATGGCCATTGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATCTTACTCCTTTTTGTAACACCTAGTAGGTGGCACAAGTTGTTGAAGGGGGATCATGCTTCCTATGTCGAGACAGTACCTTACAGATACATAGTATTGTTCACACTCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCTTTGCCTTTCTTTTTACTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCACCATCTTAGGGAACTGGATGCAGCTGAATACGAAGAAATAGTTGCTGCTCCAGGACTAACTTTCAATAGGTCTTCCAGGGAGGTAGAATCACCCAGAGTTGGATCAGTGGAAATAGTTAATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTTGAAGGTTAGAAATGTCAGCTTTAGTGAGGAAAGAAATCGCCAGGTGCACCCTGATGAAACAGGATCTCCAGACCCAACTTGTTAG 2025 0.4049 MVVADMESLKTPFKGVIKDLQGRALFYKDDWTTGLYSGTRILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDKDSLGRELFLAWAGWVCIWTALLLFLLAIFNAGNIIKRFTRIAGELFGMLITVLFIQEAIKGIVSEFNVPKEGDPTSKKYHFDWLYANGLMGIIFSFGLLYTSLKSRRARSWLYGTGWFRSFVADYGVPFMVVVWTALSFIVPSKVPSGVPRRLTSPLVWESTSLHHWTVIKDMGKVSPSYIFAAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQMIRRKMVKSAKESINLKASNSEIYGKMQAVFIEMDNCPDNHLVVKELEDLKEVVLNGEDKGHDNKSNFDPEKHIDKYLPVRVKEQRVSNLLQSIFVGASVFGMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLKGDHASYVETVPYRYIVLFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPHHLRELDAAEYEEIVAAPGLTFNRSSREVESPRVGSVEIVNAEILDELTTNRGELKVRNVSFSEERNRQVHPDETGSPDPTC 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3478g00010 674 PANTHER ANION EXCHANGE PROTEIN 10 607 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vium3478g00010 674 Pfam HCO3- transporter family 205 380 IPR011531 GO:0006820|GO:0016020
Vium3478g00010 674 Pfam HCO3- transporter family 459 549 IPR011531 GO:0006820|GO:0016020
Vium3478g00010 674 Pfam HCO3- transporter family 12 185 IPR011531 GO:0006820|GO:0016020
Vium3478g00010 674 Gene3D Helical hairpin bin 23 65 - -
Vium3478g00010 674 MobiDBLite consensus disorder prediction 655 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3478g00010 Vium-Chr3478 72725 77248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3478g00010 6 666 Antiporters AT1G74810 68.468 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3478g00010 K24194 - gmx:100811184 1187.17