Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3474g00004 ATGGCAAAGTACTTTGTTTCAGTGGTTAAGAAAGCCATTTGTCCACAATCACATTGTAGTCTTCTCCTTCGAGAATTGCCTACACACCTTGTCACCAAGTATGTGAAGAAATCTTCATGTTTTTCCTTAACCAATATTTTATACTTAGTGAGAGGGAGTAATGGATCGCCACAGCCAGGTTCAAGAGGAGCAGAAGCTCTTAAACATGTAGCTCCTGGTTCATCTATTTCTGTTAAATATCACCCACTTTTTGGTCCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTGTACACCAGCCATCATTCAGAATTTTGTGAAATCCACAAAAGAATGATAGTAATAAGGAAGAAGAGAAAGTTGCATCTGTAATCAAAGTTGTATGTAATATGGAGCTTGTCGAGGCAGCCCCCAGACTTGATAAACTTAAGTCTTTACTATTAGAAAAGACTTACAATTTTGAGGACTATGATGTGGGAAATTTAGAAGACAACCAGGAATCTACAATAGGATTATATAGCTGGAATGATCTTGTCCACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCCGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTCTTGGAATGCTTTTGAAAAATTCGGTGTTAAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTGAGTACACTGGTATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTCCATACATATGGCACCAAAGTAAATGAAGGCATGCCTGGCTGTGCCTGGAAATTGGACGAGAAGCGAGTATGTATCCATTTTGCAAGAGAAATCCTGAAAGGGGGTAAAAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGGTTCCAGATGGAATGCAGCCCAGTATTGATCTTGTGGAAGGAGAGGTATTAATAGAGAGAGTTGGAGTTGAGACATGGATTCGTGCCTTCAGCGTCGCATCTTTGCCTTCGACTCCAGCTGCGTTCACCATTCTTTTCAGAGAGAGGACAAAATGGGAATGGAAAGATCTGCAGCCGTATGTCAGAGATCTGAAGATACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACGCAACCATCGCCTGATGCGGAACCAGTTTTCAGCGCAAGATAG 1335 0.4165 MAKYFVSVVKKAICPQSHCSLLLRELPTHLVTKYVKKSSCFSLTNILYLVRGSNGSPQPGSRGAEALKHVAPGSSISVKYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVHQPSFRILXNPQKNDSNKEEEKVXASVIKVVSXNMELVEAAPRLDKLKSLLLEKTYNFEDYDVGNLEDNQESTIGLYSWNDLVHNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVSTLVSDGFPGVLARHCFHTYGTKVNEGMPGCAWKLDEKRVCIHFAREILKGGKRKLESFMDEWRQKVPDGMQPSIDLVEGEVLIERVGVETWIRAFSVASLPSTPAEXFTILFRERTKWEWKDLQPYVRDLKIPGLSSEGLLLKYTRRTQPSPDAEPVFSAR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3474g00004 447 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 63 447 IPR019128 GO:0007064|GO:0031390
Vium3474g00004 447 Pfam Sister chromatid cohesion protein Dcc1 91 413 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3474g00004 63 447 C3H Transcription Factor Family AT2G44580 55.754 5.23e-158 450