Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3472g00003 ATGGCAATTACTTCAGCGACTCTTTTCAAGATTATCTTTGTTTTCTTCATTCTCGTCACTCTTCTCACACCTCAAGCCGTGGCTGATTGTGAAGCTCAATCAGCAAACGCATGCAACAACAAAAAGAAAGCCTTGCCTCTAAAACTCATAGCCGTATTTGCCATTTTAGTTTGTAGCATAATTGGTGTCACACTACCCTTAGTGACACGTTCAATCCCAGCTTTGAACCCTGAAAACGATCTCTTCGTAATTGTGAAATGCTTTGCGGCTGGTATAATTCTAGGCACGGGCTTCATGCACGTGCTTCCCGATTCCTTTGACATGTTGCGGTCTGATTGCTTGAAGGAGAAACTGTGGCACGAGTTTCCATTTTCGGGATTTGTTGCTATGTTCTCTGCTATTATAACGATGATGGTGGATTCTTTGGCTACTAGTGCTTACACAAAGAAGATTAGGACTGAGATTATTTCATCTGAGAGCAACCCTGCAGGTGGTGGAGACCAAGAGATGGGTGGTGTTGTTAACTTTGGCCACCACCACCCTGATAACAAGACAGAAGGCCAATCACAGCTTCTACGTTATCGTGTTATTGCCATGGTATTAGAACTTGGAATTGTGGTTCATTCAGTGGTTATAGGACTTGGTATGGGAGCCTCAAACAACACATGCACCATAAAAGGTCTAATAGCTGCGCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGAGGGTGCATTCTGCAGGCCCAATACAAGTCCTTAAAAAATGTCACTATGATGTTTTTCTTTTCCGTGACAACCCCATTTGGAATTGTCCTAGGAATTGCATTGTCGATAATCTACAGAGAAAACAGTTCAAGTGCACTCATCACTGTGGGGTTGCTGAACGCTTCTTCTGCTGGTCTTTTGATTTACATGGCTTTGGTTGATCTTCTTTCTACTGATTTCATGAGCCCTAGATTGCAGGGAAGCGTCAACCTTCAATTAAAATCTTACTTAGCAGTGTTTTTGGGTGCTGCTGGCATGTCTCTCATGGCAAAGTGGGCTTAG 1053 0.4321 MAITSATLFKIIFVFFILVTLLTPQAVADCEAQSANACNNKKKALPLKLIAVFAILVCSIIGVTLPLVTRSIPALNPENDLFVIVKCFAAGIILGTGFMHVLPDSFDMLRSDCLKEKLWHEFPFSGFVAMFSAIITMMVDSLATSAYTKKIRTEIISSESNPAGGGDQEMGGVVNFGHHHPDNKTEGQSQLLRYRVIAMVLELGIVVHSVVIGLGMGASNNTCTIKGLIAALCFHQMFEGMGLGGCILQAQYKSLKNVTMMFFFSVTTPFGIVLGIALSIIYRENSSSALITVGLLNASSAGLLIYMALVDLLSTDFMSPRLQGSVNLQLKSYLAVFLGAAGMSLMAKWA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3472g00003 350 Pfam ZIP Zinc transporter 47 347 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium3472g00003 350 NCBIfam ZIP zinc/iron transport family 30 350 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium3472g00003 350 PANTHER ZINC/IRON TRANSPORTER 44 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3472g00003 Vium-Chr3472 51491 54314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3472g00003 25 350 Inorganic Solute Cotransporters AT1G31260 61.765 1.80e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3472g00003 K14709 - gmx:100801759 537.339