Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3459g00007 ATGAATTCCCATTGCTTCTTACGTTTCCCTTTATCATGTTTTTTTCTCTTTGCTTTCGCCCCATGTTGTTTTTCACACCCTTCTCTCCTTGGCGTACACCCCCTAGATGAGAAATATTATAGCTCTGAGGTGATCAAGTGCAAGGATGGATCAAAATCCTTCACCAGAGACCGTCTTAATGACAATTTCTGTGACTGCCCCGATGGCACTGATGAACCTGGGACTTCAGCTTGCCCTTCCGCAAAGTTTTATTGCAGAAACCTTGGTAGCAAGCCACAGTTTATAGTTTCTTCTCATGTTAATGATCACTTTTGTGATTGTTGTGACGGAAGTGATGAACATGATGGAATCATTTGTTGCCCAAACACATGTGTCATGGGTGGAAATGCAGAGTCGAAAATTAGCTTTTGCAAGTCAAATAAAAAAGTGAAGTCGGACGAATCAGTTCATAACGTTACTGGTTTGAAGTTGGTGTTTATTCTACAAATGGTTCTGGTTATCTTTCTGGTATTTCTCTGGAGTTTCCGATGCCGCACCAGATCAAGAAAGAAACTTCACCATTGA 564 0.4113 MNSHCFLRFPLSCFFLFAFAPCCFSHPSLLGVHPLDEKYYSSEVIKCKDGSKSFTRDRLNDNFCDCPDGTDEPGTSACPSAKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEHDGIICCPNTCVMGGNAESKISFCKSNKKVKSDESVHNVTGLKLVFILQMVLVIFLVFLWSFRCRTRSRKKLHH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3459g00007 187 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 145 IPR039794 -
Vium3459g00007 187 Pfam Glucosidase II beta subunit-like 27 144 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3459g00007 Vium-Chr3459 136561 142863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3459g00007 29 130 Calmodulin-binding Proteins AT5G56360 66.990 1.10e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3459g00007 - - gmx:100783506 325.094