Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3450g00001 ATGGCGAAAGAGTACGGAGAAGTTGAGTTGTTTGGTTTGAGGGGAAGCCCTTATGCTGGCAGGGTGCAGATAGCGCTGGAACTGAAGGGGGTGAAATACAGATACGTTGAAGAAGATCTTAGAAACAAGAGTGATCTTCTTCTGAAATACAATCCTATTCACAAGAAGGTTCCTGTGCTTGTCCACAACGGAAGACCTTTGGCTGAGTCCCTTGTCATCCTCGAATACATTGATGAGATATGGCAAAATCATCCCATCTTGCCGCAGCACCCCTATGATAGATCCTTGGCTCGATTCTGGTCAAGGTTTATTGATGACAAGTGTCTGCCTGCAATATCAAAGGCTGCATTTACTGCAAATCAGGAGGAACGGGAGAAAGGCACTGAGGAATCACTTCATGCTCTTCAGTTTCTGGAGGATGAACTGAAACACAAGTTCTTTGGTGGTGAGAGTATTGGCCTAGTGGACATAGCCGCCGGCTTCATAGCTTTCTGGCTCCCTGCAATTCAAGAGGCTGTGGGGTTGAAACTGCTCAGCTCTAACAACTTTCCAAAGCTTTCTAAATGGAGTGAAGAATACACCAACCACCCCGTTGTCAAAGAGAACCTTCCCCAAAGAGAGAGAGTTGTGGGTTTTTTCAAAGCGCGATATGCATCCATTATTGCTCAAAACTAG 675 0.4578 MAKEYGEVELFGLRGSPYAGRVQIALELKGVKYRYVEEDLRNKSDLLLKYNPIHKKVPVLVHNGRPLAESLVILEYIDEIWQNHPILPQHPYDRSLARFWSRFIDDKCLPAISKAAFTANQEEREKGTEESLHALQFLEDELKHKFFGGESIGLVDIAAGFIAFWLPAIQEAVGLKLLSSNNFPKLSKWSEEYTNHPVVKENLPQRERVVGFFKARYASIIAQN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3450g00001 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Vium3450g00001 224 CDD GST_N_Tau 8 81 - -
Vium3450g00001 224 FunFam Tau class glutathione S-transferase 1 89 - -
Vium3450g00001 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vium3450g00001 224 Gene3D - 90 224 - -
Vium3450g00001 224 Pfam Glutathione S-transferase, C-terminal domain 107 197 IPR004046 -
Vium3450g00001 224 Gene3D Glutaredoxin 1 89 - -
Vium3450g00001 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Vium3450g00001 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Vium3450g00001 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Vium3450g00001 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Vium3450g00001 224 FunFam Tau class glutathione S-transferase 87 223 - -
Vium3450g00001 224 SFLD Main.3: Omega- and Tau-like 6 222 IPR045073 -
Vium3450g00001 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vium3450g00001 224 SFLD Glutathione Transferase (cytosolic) 6 222 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3450g00001 Vium-Chr3450 3796 4870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3450g00001 8 223 Glutathione S-transferase Gene Family AT3G09270 51.142 1.59e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3450g00001 K00799 - gmx:100306119 381.719