Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3435g00008 ATGACCGAGTCAATGCACGCCGTGGAACCGTCGCCGGAGGCGGCGGTGCTGCCGGTCTCCGATCCCTTGTTCGACGAGTTTTCCACCGAGTTTGGATCCCTCCCCCTCCTGTCCATGGACTCGCTCTTCAACTCCGACACGCTTCCCTTCACCTCAGATCTCGAATTCGGCATGGATTTTGATGACAACAATGGAGAGTTCGAAATCACCTTCGACGATCTTGACGAAATCTGCATTCCTTCCGACGTCGAGGATTTCCTTCTCCCTGACGCATGTGACCCCAATAATACCTCCGTTTTGCCGCCGATTGACGAGTCTTCCGCGAAGAATTCCGATTCTCCGCGTTCAGACACGTCTGTAGTTTCTGGAGATCGGAGCTTCGGCGTTTCAAGGTTTTTCAATTCGCAAGCGTCGGATTCTGTTTCTGAGGGTAATTCGTGCAAAGAGGGTTCGCATGACGCGGCTGATGTTAGGGTTTCGAATATTTCATCGCCGGAGTCTGAATTTTGCGACCGGGAGGAGTCTTCTGGTGGACCGGTTTCCTCTCAGGGTTCAGGGAACGGTGGATCGGGTGTATATGAGGCTGTGAACTCGCCCTCGCCTGATTCTGGATCTTTCGAGAGGGACATAACATCGTCTCATGAGCATGCTGTTATGGACAAGGGTGTGAAATTGGAGGAAATTTCTGGGTGTGATCTGAAGAGGAAGAAAGTGAGTTGTGAAGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTCCTCGGTGGACACTAAGACAGAGAAACAGACTCCATCTGATGTGAATGCAATTGATGACGATGATGAGAAAAGGAAGGCAAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTACGTGGAGGAGCTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATCTGAGTAGCAAGATTTCATACATGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGTGCTGGTGTGATGTGTGCTCCTCCACCACCTGCTCCTGGGATTTACCCTCATCCTCCAATGGCACACATGACTTATCCTTGGATGCCTTGTGCTCCGTATGTTGTCAAGCCTCAGGGATCTCATGTTCCTTTGGTACCCATTCCCAGGTTGAAGCCTCAGCAACCCACTTCAGCACCCAAAGGTAAAAAGTCCGACAGTAAGAAGAGTGAGGGGAAAACTAAGAAGGTTGCTAGTATTAGTTTCTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCGCTTGTGGATTTTAAGTTTGGCGGTTTAGTGGACAATGTTCCTGATACTGGTATGTCTAGCTTTGTTAGTGATAGGGTATATGGTCAAGGTGGGGGTAAGGTTTGGTCTGTGAACGGTCCTAGGAATGGGTCTGAAAGAGATGAAGAAGTAGGGTTTTCTAATGATAGGTTTAGTGTTAAAGACAAAATGAATCATGAGAGAGGCCGGCATTTAGGAGAAGAAAGGGGTGAACGGGAGGGCCCTGATAATTTTGGTCGCCAGGGAAATGCCAGCGAGCCTCTTGTTGCTTCTTTGTATGTTCCTAGGAATGATAAGATGGTGAAGATTGATGGAAACTTAATTATCCATTCCATAATGGCTAGTGAAAAAGCTATGGCATCTCAAACTGCCGATGCAAAGGAGAAGAGAGAAACAGGTTTGGCCATTCCTAAGGATTGGGATTCTGCATTGGCTATACCTGAAGTTGGAAGACATCCAAATGTATATAGGGTTCCTGCTGAACAGAGGAAGGCTCTTGCCTCTGGTTCAACCAAAGCTTTAAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGTCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCAAGTCCTGGAGCTATAGTTCCTGCAACATCAGTATCTAATGTGTCTACCGAAAAGCGTCAGAATGCTACCTCGGTGAAAAAGACCAGGAATAGAAGAACCCTTCGTGGGCTTCCAGATTCTCTTAATGGATCGAGTCTGAACATAACTGAAGAGCTTGTAAAAAACATGGATAAAAACCACCTCCATGGTAATGAATCTTCCATGGTGGTTTCAGTTCTTGTTGATCCTAAAGAGGCTGGCGATGGTGATGTCGATGGCATGATGAGACCGAAGTCACTCTCTCGGATCTTCGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCTTGCGGTCTGCCTCGTGCTTCTCCCCATTTGGTGACTGCTTATGTATGA 2337 0.4711 MTESMHAVEPSPEAAVLPVSDPLFDEFSTEFGSLPLLSMDSLFNSDTLPFTSDLEFGMDFDDNNGEFEITFDDLDEICIPSDVEDFLLPDACDPNNTSVLPPIDESSAKNSDSPRSDTSVVSGDRSFGVSRFFNSQASDSVSEGNSCKEGSHDAADVRVSNISSPESEFCDREESSGGPVSSQGSGNGGSGVYEAVNSPSPDSGSFERDITSSHEHAVMDKGVKLEEISGCDLKRKKVSCEGSATKHRRFSSSSVDTKTEKQTPSDVNAIDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQVGAGVMCAPPPPAPGIYPHPPMAHMTYPWMPCAPYVVKPQGSHVPLVPIPRLKPQQPTSAPKGKKSDSKKSEGKTKKVASISFLGLFFFIMLFGGLVPLVDFKFGGLVDNVPDTGMSSFVSDRVYGQGGGKVWSVNGPRNGSERDEEVGFSNDRFSVKDKMNHERGRHLGEERGEREGPDNFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTADAKEKRETGLAIPKDWDSALAIPEVGRHPNVYRVPAEQRKALASGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPSPGAIVPATSVSNVSTEKRQNATSVKKTRNRRTLRGLPDSLNGSSLNITEELVKNMDKNHLHGNESSMVVSVLVDPKEAGDGDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVTAYV 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3435g00008 778 MobiDBLite consensus disorder prediction 97 123 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 137 224 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 379 407 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 99 123 - -
Vium3435g00008 778 Gene3D - 274 336 - -
Vium3435g00008 778 Coils Coil 299 319 - -
Vium3435g00008 778 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 274 334 IPR004827 GO:0003700|GO:0006355
Vium3435g00008 778 SMART brlzneu 272 336 IPR004827 GO:0003700|GO:0006355
Vium3435g00008 778 CDD bZIP_HY5-like 277 328 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 245 264 - -
Vium3435g00008 778 Pfam bZIP transcription factor 276 334 IPR004827 GO:0003700|GO:0006355
Vium3435g00008 778 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 54 773 - -
Vium3435g00008 778 SUPERFAMILY Leucine zipper domain 276 334 IPR046347 GO:0003700|GO:0006355
Vium3435g00008 778 MobiDBLite consensus disorder prediction 494 513 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 208 224 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 494 520 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 176 207 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 662 681 - -
Vium3435g00008 778 MobiDBLite consensus disorder prediction 236 270 - -
Vium3435g00008 778 FunFam bZIP transcription factor 49 275 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3435g00008 29 775 bZIP Transcription Factor Family AT2G40950 47.582 5.15e-170 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium3435g00008 bZIP_1 8.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3435g00008 K25783 - gmx:100101871 1120.92