Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3433g00009 ATGGATGAATATCTTCATATGGATTCCCAAGTTGGTTCTAGTTTGATATCTGATTTATCTTCATTCATTAGCAAAGTTGGAGAGGGAGATTTGACAAATAAATTTACCACAAATGAAATATTTCGTTCACGGGAGCACTTACTTTATAGGGTAAGAGGGATGACTTATGATTTAGGATTTGTTGTGGTAATAGTAAGATCGGATATAGCTACTAGTGTACGGGAAAGAAAAACGTTCATCATACTTCGATGTGAAAGAGGAGGGAAATATCAAAAATACAAAGCCGATGCGGTGCCTAGTGTATACGACACTCGTAAATGTGAGTGTCTGTTTAGATTAAAGGGTAAACCATGTTCAAACGGGGATGGATGGGTGTTGAAGGTAATGTGTGAACATCACAACCATGAGTTGGCTGAAACTTTAGTTGGGCATCCTTATGCTGGCAGGGATAAGTACATTCATTGGAGTAGGTGTTCCGACGATTCAGAGGTTGTTACTGACCTGTTTTGGACACATCCTGATGCGGTGAAATTGTTAAACTCATTTAATGTTGTATTTTTGATGGATTCCACATATAAAACAAACAGAAATAGACTTCCATTACTTGAGATTGTGGGCATGACGTCTATAGGGTTAAACTTCTCTACAACATTTTCTTTCTTGTCTACTAAACTAGAGAGTAATTTCACATGGGCTTTGGAAAAGATGAAAGGTTTATTTTTAACATCTGAGGGTGGTCCTAAAGTCATTGTCACTGACCGAGACTTGGCTTTGATGAATGCCATTGCAAATGTATTCCCTGAGTCATATAAGATGTTATGTCAGTTCCACATCCTTAAAAATGTTAAAGCTAAATACAAAATGTTAGTTAATTCTAATGAGGTTTGGGATGTGTTGATGGATGCATGGCAAAATGTGATGGATTGTGCTGATGAAAGCTTATTTGCTGAGTATGTGAATGATTTTCAATATGCGAGCAGTTCATGGGTTGAGTCTGCTCATTGGAGTTTGAAGAAAGTTCTGGGCAATAATATGGGTGATTTGTGTTCTTGTTGGGATATTATTCATAACGTCGTTATCCTACAACACAACAAGATTAAGGCATCATTTGAAAGAAGTTTGTTGCTCACGAGTGACCCTTTTAAAGGATACAGATATAGAAAACTTATTGGGAGTATCTCTCGATATGCATTGGATCTCATTGCTAAGGAATTGGAAAGAGTGCAGTAG 1230 0.3724 MDEYLHMDSQVGSSLISDLSSFISKVGEGDLTNKFTTNEIFRSREHLLYRVRGMTYDLGFVVVIVRSDIATSVRERKTFIILRCERGGKYQKYKADAVPSVYDTRKCECLFRLKGKPCSNGDGWVLKVMCEHHNHELAETLVGHPYAGRDKYIHWSRCSDDSEVVTDLFWTHPDAVKLLNSFNVVFLMDSTYKTNRNRLPLLEIVGMTSIGLNFSTTFSFLSTKLESNFTWALEKMKGLFLTSEGGPKVIVTDRDLALMNAIANVFPESYKMLCQFHILKNVKAKYKMLVNSNEVWDVLMDAWQNVMDCADESLFAEYVNDFQYASSSWVESAHWSLKKVLGNNMGDLCSCWDIIHNVVILQHNKIKASFERSLLLTSDPFKGYRYRKLIGSISRYALDLIAKELERVQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3433g00009 409 Pfam MULE transposase domain 185 281 IPR018289 -
Vium3433g00009 409 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 307 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3433g00009 Vium-Chr3433 152652 154131 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vium3433g00009 MULE 5.3e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3433g00009 - - var:108344422 480.715