Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3433g00005 ATGAAGACGATAATAGAATGCTGTGTCTCTGCAAGTGCCACACGTGTCTGTGGCCTTTTGCCATACAGAAATTATTCATGTAATAGCATGCTTGCAACTTGTTCAGCATCATCCTCAACAACAAGAAGAACTTTATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTTCTCCTCCTTCTTCCTCTTCTTCTTCTTCTTCTTCAAAATTACCCTTTTCAAAGTTCTTTGAGATCCCTGATTCCGGTGGAGTTAAGGCTTTGGACCTCCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGCAGGCTGGCAGCAAAACAGGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGACAATGGCGAACCCAATCCATTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATAGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATCAAAACACATCACAAGAGCCAATCCCACCGAACGCAGAGGTTGTTCACTACCATTTTTAA 588 0.4388 MKTIIECCVSASATRVCGLLPYRNYSCNSMLATCSASSSTTRRTLSLSLISTTFSAFIFSLSPPSSSSSSSSSKLPFSKFFEIPDSGGVKALDLLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNAEVVHYHF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3433g00005 195 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 105 191 IPR001179 GO:0003755
Vium3433g00005 195 SUPERFAMILY FKBP-like 86 191 - -
Vium3433g00005 195 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 17 187 IPR044197 -
Vium3433g00005 195 Gene3D - 70 193 IPR046357 GO:0003755
Vium3433g00005 195 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 101 191 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3433g00005 Vium-Chr3433 41043 43331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3433g00005 64 188 Calmodulin-binding Proteins AT5G48570 37.302 9.28e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3433g00005 - - gmx:100808927 275.018