Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3414g00005 ATGGAGATCATTGCGGTTTTCTTATGCATTTTCTTTTTCTTCTCATCCCTTCTTTCTTATCCATTAATAAAGAAGCAGAAGAAACCTCAACAAATACCTAAGCCGAAGCTTCCCCCTGGTTCAATGGGTTGGCCTTACATAGGAGAGACCCTTCAACTCTATTCTCAGGACCCTAACATCTTCTTTGCATCTAAGCAAAAAAGATATGGAGAAATCTTTAAGACACACATACTAGGTTGTCCATGCGTGATGTTGGCCAGCCCCGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCCACATACCCCAAAAGCAAAGAGAAGCTAATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGAATACCACACTCGCATCAGGAAGCTGGTGCAAACCTCTCTTTCTCCTGAAACCATTCGGAAACTCATCCCAGACATCGAAACCGAGGTTGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACAACTCATTAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGACACTTGGAACGCAAATATAGAGACCAGCTTAAGGAAAACTACTGCATAGTAGAGAAAGGGTACAACTCTTTTCCAAACAGGATACCTGGAACTGCCTACTCAAAAGCACTTTTGGCAAGGAGGAGAATCAGAGAGATTATAAGTGAGATAATCAGCAAGAGAAAGGAGCAGAGATTGGTGGATAAGGATCTGTTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGACAAACGCCAAGTGATGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAGTAAAAGCAGAGCAAATGGCAGTGTATGAAGCTAATGAAGGGAAGAAGCCATTGACATGGAGTCAGACCAGAAATATGCCAATTACTCATAGGGTAATTTTGGAAAGCCTTAGGATGGCAAGTATCATTTCATTTACTTTTAGGGAAGCTGTGGTTGATGTGGTGTACAAAGGATATCTTATACCCAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTTCTCCTCACAATTTTGACCCATCAAGATTTGAGGTTGCTCCAAAGCCCAATACTTTCATGCCATTTGGCAATGGAGTGCATTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGTTCATTTTGATTCATCATCTAGTAACAAAATATAGGTGGGAGGTTGTGGGATATCAGAACGGAATCCAATATAGTCCATTCCCAGTCCCTATGTATGGTCTACCAACAAGATTTTGGAGAAACCAGTGGAATCAAAGATGA 1425 0.4204 MEIIAVFLCIFFFFSSLLSYPLIKKQKKPQQIPKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGEYHTRIRKLVQTSLSPETIRKLIPDIETEVVSSLESWVSAGQLINAFQEMKKFSFNIGILSVFGHLERKYRDQLKENYCIVEKGYNSFPNRIPGTAYSKALLARRRIREIISEIISKRKEQRLVDKDLLGHLLNYKDEKGQTPSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAVKAEQMAVYEANEGKKPLTWSQTRNMPITHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYQNGIQYSPFPVPMYGLPTRFWRNQWNQR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3414g00005 474 CDD CYP90-like 66 465 - -
Vium3414g00005 474 FunFam Abscisic acid 8 26 468 - -
Vium3414g00005 474 Pfam Cytochrome P450 38 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 SUPERFAMILY Cytochrome P450 33 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PANTHER CYTOCHROME P450 26 35 457 - -
Vium3414g00005 474 Gene3D Cytochrome P450 26 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Vium3414g00005 474 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3414g00005 474 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3414g00005 Vium-Chr3414 66822 70374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3414g00005 7 469 Cytochrome P450 AT3G19270 70.905 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3414g00005 K09843 - gmx:100806350 846.269