Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3389g00001 ATGGTTGCACCACTTGTAACTGTTGCATGCCTCTTTCTTCCTCTGCTTCTGTTAATCTTTTTCCAAAACTGGAGAAAGGGAAAGAATTCACGGTTTCCACCTGGTCCAAGAGGGCTTCCCATAGTAGGGAACCTTCTTCATGTCGACAGTACCACTCTTCATCTGCAGCTGTGGGAACTGTCAAAGAAATACGGACCCATTGTTTCCCTTAGATTTGGATCAAGGAAAGCCATTGCCGTTTGCACATCAGAATTGGCCAGAGAGGTGTTGAAAGACCGTGACCTCGAGTGCTGTGGAAGACCTAAACTGCTTGGCCAACAAACTTTGTTCTTCAAAGGCTACGATGTTATATTCTCTCCTTACGGTGAGTTCTGGAGAGAGATCAGAAAGATCTGCGTGCTGAATGTCCTTAGCCAGAAACAGGTCGCAACATTTTCACCCATAAGACACAGTGAGTTGAAGGATATGATGAAAAGAATCTCGAGGAACGCTTCATCCGGAAAGCTTTATAACTTTACCGAAGCGACTATTTCTCTTACAAGCACTATCATATGTAGAATACTTTTTGGGAGAAGCTACGAAGATAACGAAGCCGATGGGAGTAGATTCTATTCCCTACTCAAAGGCTGCCAAGAGATGATGGTTGCCTTCTTTTTCTCTGATTTCATTCCTTCCTTGGGTTGGATCGATACTGTCACAGGAAAGAAGGCTCGTCTTCGTGCTATTTTTCAGGAGGTTGATAGCTTCTTCCAGGACGCCATTGATGAACACCTTGATCCCAAGAGAGTAGTCACTCCAGAGAACACAGATATCACGGATATCATTCTTCAACTTCAGAAGCAGCGTACCAGTTCCATCGAACTCACAGACGACGTCGTCAAGGCCATCCTCATGGACTTGCTTCTAGCATCAACAGATTCAAGTTCGGCCTCCTTGGTGTGGAACATGACTGCCCTATTAAAGAATCCAAGAGTGATGAAGAAACTTCAAGCTGAAATCAGGGGTAAGGCAGGTGGAAAGGAATTTCTGGACGACGAAGATGTTCAGAATCTGCCGTATCTGAGGGCGGTGATAAAAGAGACATTCAGATACTATCCACCAGGGCCAATTCTGGTGCAGAGAGAAACAAACGAGGATTGTGTGATAGGAGGTTACGAAATTCCTGCAAAGACAACATTGTACGTGAATGCTTGGGCGATTCATAAGGACGAAAACAACTGGAAAAACCCATTTGAGTATTATCCGGAGAGGTTCATGGATAGCAGCGTAACTTTCAGAGGAACAGATTATGAGTTTCTTCCGTTCGGTTCTGGTCGTAGAGTTTGTCCTGGGATGCCTATGGCGATTGCGTCGTTGGATCTGATTCTTGCGAATCTTCTGAATGCATTCGATTGGGAACTGCCAGCAGGAATGAAACCAGAAGACTTGGATGTTTTGACAGATCCAGGACTCACAGTGCACAAGAGGAATCCTCTTCATATTCTTCCCAAACGTGTAATCTAA 1503 0.4478 MVAPLVTVACLFLPLLLLIFFQNWRKGKNSRFPPGPRGLPIVGNLLHVDSTTLHLQLWELSKKYGPIVSLRFGSRKAIAVCTSELAREVLKDRDLECCGRPKLLGQQTLFFKGYDVIFSPYGEFWREIRKICVLNVLSQKQVATFSPIRHSELKDMMKRISRNASSGKLYNFTEATISLTSTIICRILFGRSYEDNEADGSRFYSLLKGCQEMMVAFFFSDFIPSLGWIDTVTGKKARLRAIFQEVDSFFQDAIDEHLDPKRVVTPENTDITDIILQLQKQRTSSIELTDDVVKAILMDLLLASTDSSSASLVWNMTALLKNPRVMKKLQAEIRGKAGGKEFLDDEDVQNLPYLRAVIKETFRYYPPGPILVQRETNEDCVIGGYEIPAKTTLYVNAWAIHKDENNWKNPFEYYPERFMDSSVTFRGTDYEFLPFGSGRRVCPGMPMAIASLDLILANLLNAFDWELPAGMKPEDLDVLTDPGLTVHKRNPLHILPKRVI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3389g00001 500 PANTHER CYTOCHROME P450 71B11-RELATED 17 497 - -
Vium3389g00001 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vium3389g00001 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 CDD CYP71-like 63 492 - -
Vium3389g00001 500 Pfam Cytochrome P450 33 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 FunFam Cytochrome P450 83B1 19 495 - -
Vium3389g00001 500 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3389g00001 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3389g00001 Vium-Chr3389 78 2027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3389g00001 1 500 Cytochrome P450 AT4G31500 42.147 3.62e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3389g00001 - - gmx:100801312 622.854