Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3382g00011 ATGGAATCTGAAATTTTGTTTTGTTTACTTCTTCTGTTTGCAACTCCCCTTTGGTTCTTAGCCACAATAGTATTTAAAGGCAAATCACCATCCTCTCCTCCTTCTTCCACGCCCCCCGCTGCCACCACCACCGGAATTCCCAAAGTCTATCCTATCATCGGTTCAGTGCCGTCCATCATAGCAAACAAGCATCGACGCATACACTGGACGTCCGACATACTCCATGCCTCCCCCTCCTCCACCTTCGTCCTCCACCGCGGCTTCGGCTCCCGCCATCTCTTCACAGCTAATCCTAGTGTAGTACAACACATTCTCAAGACCAACTTCCCACTCTACCCGAAGGGCCCAACCTTCAAATGCGCCCTTGACGATTTTCTCGGCCAGGGAATTTTCAACGCAGATGGCCCCGATTGGAAACTTCAACGCCAAATATCCAGCCATGAATTCAGCACTCAGAGCCTCCGCAAGTTCATCGAAACCGTCGTCGACGTGCAGCTCTCCGACCGCCTTCTGCCCCTTCTCGATGACGCATCCCGGAACAAAACCATCATCTCAGACTTCCAAAATACTCTCCAACGCTTCACCTTGGACAACATCTGCAAAATCGCTTGCGGCTTCGACCCGGAGTGCTTCCTCCGGGAAACCCCCTTCACCACCGCCATAACCGACGCCACAATAATCTGCAGTAAGAGACTACACGCGGCGTTCCCTCTGATATGGAAAACCAAAAAAGTCCTTAACCTAGGCTCGGAGAAGCGGCTGAAGGAAGCGGTGTCGGAAGTGAAGGATTTGGCAAGGAGAATAATAAGAGAGAAGAAAAAGGAGCTTCGGGAAAAGGAAACCCTAGATTCCGTGGATCTTTTGTCACGGTTTTTATGCTCAGGCCATTCGGACGAAGAGTTCGTTATAGACATAATCCTCAGCTTTATCATCGCGGGGAGGGACACAACCTCAGGGGTGCTCACCTGGTTCTTCTGGCTACTCTCGAACCACCCGCACGTGGAGGAGAAGGTTCTAAAGGAGGTGACGCAGCAAGACACGGTGTACACACACGTGTGTGAGGAAATGAAAGACATGGTCTACACGCATGCGGCGTTGTGTGAGACCATGAGGCTTTACCCACCCGTTCCGGCGAACTCGAAAGAGGCCATGCGCGATGATCTTTTACCCGATGGGAGTTTGGTGAAGAGTGGGTGGAGGGTGACGTATCATATTTACGCCATGGGGAGGTCGGAGAAGATTTGGGGGCCGGATTGGGCGGAGTTTCGGCCGGAGAGGTGGCTGACTTGGGAGGAGGTGGAAGGCAGGTGGAAGTTCGTGGCCGTGGATGCTTTTACTTATCCCGTGTTTCAGGCTGGTCCAAGGATCTGTTTGGGTAAGGAAATGTCGTTCTTGCAAATGAAACGAATTGTGGCCGGGATTTTGAGACGCTTTAAGGTGGTTTCCGACGTGGCGGAACCCAAGTACGGTGGCTACTTCACTTCTTTCATGGTGGGTGGCTTCCCCGTCAGAATTCAGAATCGTAATTAA 1530 0.5183 MESEILFCLLLLFATPLWFLATIVFKGKSPSSPPSSTPPAATTTGIPKVYPIIGSVPSIIANKHRRIHWTSDILHASPSSTFVLHRGFGSRHLFTANPSVVQHILKTNFPLYPKGPTFKCALDDFLGQGIFNADGPDWKLQRQISSHEFSTQSLRKFIETVVDVQLSDRLLPLLDDASRNKTIISDFQNTLQRFTLDNICKIACGFDPECFLRETPFTTAITDATIICSKRLHAAFPLIWKTKKVLNLGSEKRLKEAVSEVKDLARRIIREKKKELREKETLDSVDLLSRFLCSGHSDEEFVIDIILSFIIAGRDTTSGVLTWFFWLLSNHPHVEEKVLKEVTQQDTVYTHVCEEMKDMVYTHAALCETMRLYPPVPANSKEAMRDDLLPDGSLVKSGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLTWEEVEGRWKFVAVDAFTYPVFQAGPRICLGKEMSFLQMKRIVAGILRRFKVVSDVAEPKYGGYFTSFMVGGFPVRIQNRN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3382g00011 509 Coils Coil 254 274 - -
Vium3382g00011 509 Gene3D Cytochrome P450 42 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 CDD CYP86A 81 501 - -
Vium3382g00011 509 SUPERFAMILY Cytochrome P450 47 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3382g00011 509 PANTHER CYTOCHROME P450 36 501 - -
Vium3382g00011 509 Pfam Cytochrome P450 47 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3382g00011 Vium-Chr3382 177340 179251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3382g00011 34 508 Cytochrome P450 AT5G63450 45.228 6.99e-134 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3382g00011 K20769 K20768 gmx:100781020 737.643