Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3377g00012 ATGGCGGAAGGGCTGAACAGAGAACAGTACGTGTACCTTGCCAAGCTCTCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGCAGAAGGTGGTGGTGGGGTGGACTCCAGCGACGGAGCTTAGCGTGGAGGAGCGCAACCTACTCTCGGTCGCTTACAAGAACGTCATCGGCTCCCTGCGTGCGGCGTGGCGGATCGTTTCTTCGATCGAGCAGAAGGAAGAGGGTCGCAAGAACGAGGAGCACGTGGCGCTCGTCAAGCAATACAGATCCAAGGTGGAGACGGAGCTCTCGAACGTGTGCGCCAGCATCCTAAACCTCTTGGACTCCAACCTCGTCGCCTCTGCCTCCAACACCGAGTCCAAGGTCTTCTATTTGAAGATGAAGGGCGATTATCACCGCTATCTCGCTGAATTTAAGGTTGGGGATGAGCGAAAGGCTGCAGCTGAGGATACCATGTTGTCTTACAAGGCTGCCCAGGACGTTGCTTATGCGGATCTTCCACCCACCCACCCTATAAGATTGGGCCTTGCTCTCAATTTCTCGGTCTTCTACTATGAAATCCTCAACCAGTCTGATAAAGCGTGTGGCATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACATTGGGAGAAGAATCCTACAAAGACAGCACGCTCATAATGCAGCTTTTAAGAGACAACCTTACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA 747 0.5355 MAEGLNREQYVYLAKLSEQAERYEEMVEFMQKVVVGWTPATELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVALVKQYRSKVETELSNVCASILNLLDSNLVASASNTESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLSYKAAQDVAYADLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3377g00012 248 PANTHER 14-3-3 PROTEIN 7 242 IPR000308 -
Vium3377g00012 248 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vium3377g00012 248 Coils Coil 13 33 - -
Vium3377g00012 248 PIRSF 14-3-3 1 247 IPR000308 -
Vium3377g00012 248 SMART 1433_4 7 247 IPR023410 -
Vium3377g00012 248 Gene3D - 1 247 IPR036815 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vium3377g00012 248 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vium3377g00012 248 Pfam 14-3-3 protein 13 238 IPR023410 -
Vium3377g00012 248 SUPERFAMILY 14-3-3 protein 5 240 IPR036815 -
Vium3377g00012 248 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Vium3377g00012 248 FunFam 14-3-3 protein epsilon 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3377g00012 Vium-Chr3377 74255 76684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3377g00012 1 242 14-3-3 family AT5G65430 84.298 2.29e-153 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3377g00012 K06630 - gmx:100818967 451.055