Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3374g00004 ATGACTGGCACTGATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAACTTGCTTACAATCTACTAAGACGTTCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGACCGCAAGGTCCCGGCCAACGCAATTCCTGTTGATGGGGTGTTCTCTTTTGATCATGTTGATAGAAACACCGGTCTATTCAATAGGGTGTATCAAGTAGCTCCTCAAAAGGAGACTAGGTGCAACATAATAGAGCTGGAGAAGCCCCTGAGCACCACAGAGATCGTTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGCCGCCGCCTTGTGAGCCTTTGCAAGGCTGTGGTGGTTTCTGTAAACTACAGGCGATCGCCAGAGCACCGTTATCCATGTGCCTATGATGATGGCTGGGCAGCCCTCAAGTGGGTTAAGTCCAGGAAGTGGCTTCAGTGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCGGGCGATAGTTCTGGTGGTAACATTGCTCATCATGTGGCTGTGAGAGCTGCTGAAGAAGATATTGAAGTGCTAGGCAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAGCGAACTGAGTCAGAGAAGAAACTGGATGGGAAGTACTTTGTGAGGCTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTTCCAGAAGGAGCAGATAGAGATCATCCAGCTTGTAACCCCTTTGGTCCCAAGGGTAAAAATCTTGCAGGTCTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTGAAGAATTGTGACCAAGATGTCAAACTTCTTTACCTTAAGGAGGATCCCATACATAACTAA 963 0.4621 MTGTDEVNLSESKSVVPLNTWVLISNFKLAYNLLRRSDGTFNRELAEFLDRKVPANAIPVDGVFSFDHVDRNTGLFNRVYQVAPQKETRCNIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSLCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRKWLQCGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLAGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCDQDVKLLYLKEDPIHN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3374g00004 320 Gene3D alpha/beta hydrolase 1 319 IPR029058 -
Vium3374g00004 320 SUPERFAMILY alpha/beta-Hydrolases 100 313 IPR029058 -
Vium3374g00004 320 Pfam alpha/beta hydrolase fold 108 315 IPR013094 GO:0016787
Vium3374g00004 320 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vium3374g00004 320 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vium3374g00004 320 PANTHER ARYLACETAMIDE DEACETYLASE 36 311 - -
Vium3374g00004 320 FunFam Gibberellin receptor GID1 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3374g00004 Vium-Chr3374 18007 20779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3374g00004 1 318 Carbohydrate Esterase AT3G63010 74.922 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3374g00004 K14493 - gmx:100804463 586.26