Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3369g00001 AAAAAAATTGAAGTTGAATGTAATTTGCAGGTAACGAGGCTGGGTTGCGGGGGAATGATCCTGTGCACGGCGATCAACCACTGCGTATGCGACGGCATAGGCACGTCTCAGTTTCTACACGCCTGGGCACAGCTCACGAAAAAGCCAGAAGCGGAATTGACGATCATGCCCTTCCACTGGCGCCACGTGCTGAAACCCAGACACCCTGCGCAGGTAAAGTTCCGTCACGCGGGCTACACCGCACCAAACCCAACCCCTCAAGTGGACCTTCTAAAGTTCATACAGTCACAGCCCTTGGTAGCCACATCCTTCACCCTCACCCCCTCCCACGTCCTTCGCCTCAAGAAAGAGTGCGTCCCCTCCCTCAAGTGCACCTCCTTCGAAACCGTTGCGGCCCACACCTGGCGCTCTTGGATTCGCTCGGTGGGCCAATCCCTACCGTCCAAACTCACTGTGAAGCTCCTTTTCTCGGTCAACGTTAGAAGAACAGTTGACCTTCCGCAGGGGTATTACGGGAACGGATTCTTGCTAGCGTGCGCTGAGAGCAGCGTGGAGGACTTAGTGGACGGTAACCTGCGCCACGGAGTGAAACTTGTGCAGGAAGCTAAGGCGAGGTTGAAAGAGGAGGAGTACGTAAGGTCAATGGTTGACCTGTTAGAGGACAAAACTGTAAAAACGGATCTTTCGACGAGTTTAGTTATTTCGCAGTGGTCTAGACTGGGGTTGGAAGAGGTGGATTTTGGGGAAGGGAAACCTTTGCATATGGGTCCTTTGACCAGTGATATTTACTGCTTGTTCTTACCCGTCGCCGGTGACGCTAATGCCGTCAGAGTGCTGCTGTCTGTCCCCGCGACCATGGTGGAACGTTTTCAGTATCACATGATGAGACAAAGTCGGGAAGAAAATGAAGAAAACGGATTCTTCTGA 927 0.5275 KKIEVECNLQVTRLGCGGMILCTAINHCVCDGIGTSQFLHAWAQLTKKPEAELTIMPFHWRHVLKPRHPAQVKFRHAGYTAPNPTPQVDLLKFIQSQPLVATSFTLTPSHVLRLKKECVPSLKCTSFETVAAHTWRSWIRSVGQSLPSKLTVKLLFSVNVRRTVDLPQGYYGNGFLLACAESSVEDLVDGNLRHGVKLVQEAKARLKEEEYVRSMVDLLEDKTVKTDLSTSLVISQWSRLGLEEVDFGEGKPLHMGPLTSDIYCLFLPVAGDANAVRVLLSVPATMVERFQYHMMRQSREENEENGFF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3369g00001 308 Pfam Transferase family 9 294 - -
Vium3369g00001 308 Gene3D - 6 81 IPR023213 -
Vium3369g00001 308 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 291 - -
Vium3369g00001 308 Gene3D - 92 294 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3369g00001 Vium-Chr3369 758 1982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3369g00001 9 257 Monolignol Biosynthesis Gene Families AT5G48930 30.970 4.56e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3369g00001 - - vum:124834217 628.632