Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3362g00002 ATGGTTCCTTTGGTTTATTACTCACTCCTTTTTCTTGCTTCCATTTTCACATTCAAATTTCTTCTACGAAGAAGAAGGCTCGAAAACCTTCCACCACATCCACCAACTCTTCCCATAATCGGCAACCTCCACCTTATCAAGCCACCGCTTCACCGCTCCCTCCTCAGCCTATCGCAACAGTATGGCCCCATCTTCTCTCTCTGGTTCGGTTCACGCTTTGTGGTCGTCATCACCTCCCCAACCTTGGTTCAAGAATGTTTCACCAAATACGACACCGTTCTCGCCAACCGGCCACGGTTTCTCACGGGCAAGTACCTCTTCTACAACTACACCAGCATGGGCTCCTCCTCCTACGGCGACCACTGGCGCAACCTTCGCCGCATCATCACCATCGATGTCCTCTCCACGCAGCGTCTCAACTCCTTCTTTGAAGTCCGAAGGGAAGAAACCATGAGGGTCGTACAAAAGCTTGTTCGGGAAACGAGCAAGGGCTTCGCCCTTGTGCAGATCAGACCCAGGCTGACGGAGATGACATTCAACAACATGATGAGAATGATATCTGGGAAGCGGTACTACGGTGACGACGGTGACGTGACGGACGCGGAGGAAGCGAAGCAGTTCAGAGCCATAATCACGGAGGTTATGTCGTTGCTGGGTGCAAACAACAAGGGAGACTTCTTGCCTATGCTTCGATGGTTTGATTTCGACAGTTTGGAGAAGAGACTGAAGTCGATCAGCACCAGGGCTGATGCGTTCTTGCAGGGACTCCTTGAAGAGCATCGCAGTGGAAAACACAAAACCAATACCATGATAGAACATCTCTTGACCATGCAAGAAACGCAGCCGGAGTACTACTCCGATCATATTATCAAAGGCCTTATTCAGGGTATGCTTCTGGCTGGAACTGACACAACAGCAGTGACTATGGAGTGGGCAATGGCATCTCTATTGAATCATCCAGAGATATTGAAGAAAGCACAGGATGAAATAGACAACTGCGTTGGACAAGATCGCTTGGTAGATGAGTCAGACATTCCCAATCTTCCTTATCTTCAAAACATTATCTACGAGACACTTAGATTGTTTTCTCCAGCTCCAATGCTATTGCCTCATTATTCTTCAGAGCAGTGCACTCTTGGGGGCTTCACTGTTCCACGAGACACCATAGTGTTGATCAATGCATGGGCCATTCAGAGAGACCCTCAGACTTGGAGTGATGCGACATGCTTCAAGCCCGAGAGATTTGGACAAGAAGGGGAAGCAAACAAGTTAATTCCATTCGGATTGGGAAGAAGGGCTTGTCCCGGAATAGGTTTGGCGCATCGTTCTATGGGCTTAACTTTGGGATTACTGATTCAGTGCTTTGAATGGAAACGACCAAGTGATGAAGAAATCGATATGAGAGAGAATAAAGGGGTGGCAATGCCAAAGCTAATTCCATTGGAAGCTATGTGTAAAGCACGACCAATAAGCCAGAAAGTTATGCAGCAACTTGGTACTTAA 1503 0.479 MVPLVYYSLLFLASIFTFKFLLRRRRLENLPPHPPTLPIIGNLHLIKPPLHRSLLSLSQQYGPIFSLWFGSRFVVVITSPTLVQECFTKYDTVLANRPRFLTGKYLFYNYTSMGSSSYGDHWRNLRRIITIDVLSTQRLNSFFEVRREETMRVVQKLVRETSKGFALVQIRPRLTEMTFNNMMRMISGKRYYGDDGDVTDAEEAKQFRAIITEVMSLLGANNKGDFLPMLRWFDFDSLEKRLKSISTRADAFLQGLLEEHRSGKHKTNTMIEHLLTMQETQPEYYSDHIIKGLIQGMLLAGTDTTAVTMEWAMASLLNHPEILKKAQDEIDNCVGQDRLVDESDIPNLPYLQNIIYETLRLFSPAPMLLPHYSSEQCTLGGFTVPRDTIVLINAWAIQRDPQTWSDATCFKPERFGQEGEANKLIPFGLGRRACPGIGLAHRSMGLTLGLLIQCFEWKRPSDEEIDMRENKGVAMPKLIPLEAMCKARPISQKVMQQLGT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3362g00002 500 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 CDD CYP81 62 481 - -
Vium3362g00002 500 Gene3D Cytochrome P450 19 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 Pfam Cytochrome P450 31 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3362g00002 500 FunFam Cytochrome P450 family protein 21 491 - -
Vium3362g00002 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vium3362g00002 500 PANTHER CYTOCHROME P450 82C3-RELATED 11 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3362g00002 Vium-Chr3362 17020 18806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3362g00002 7 497 Cytochrome P450 AT4G37370 55.152 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3362g00002 K13260 K22932 gmx:100784120 873.233