Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3355g00003 ATGATGATGTTCGAGGACATTGGGTTTTGTGGCGATTTGGATTTGTTGAGTTGTCCCCTTGGGGACGAGGATGTTGTTGCTGTGAGACAAACGGATCCAGATCCTGTGGTTGAGGATGATTACAGTGATGAAGAAATTGATGTGGATGAGCTGGAGAAACGTATGTGGAGGGACAAAGTGCGGCACAAACGATTGAAAGAACAACAGAAGGCAAAGGAAGGGACTGATGCAGTGAAGCAAAGGCAATCCCATGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTAAAGTACATGCTGAAGATGATGGAGGTCTGCAAAGCACAAGGGTTTGTTTATGGCATAATTCCTGAGAAAGGGAAGCCAGTGACTGGAGCATCTGATAATCTTCGCGAATGGTGGAAGGACAAGGTCAGGTTTGATCGAAATGGTCCTGCTGCTATAGCAAAGTATCAGGCTGATAATGCAATTCCAGGGAAGAATGATGGTTGCAATTCCATTGGTCCAACTCCACACACATTGCAGGAGTTACAGGACACAACACTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGAAGGTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCCACTGGGAATGAAGTATGGTGGCCTCAAATTGGTCTTCCCAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTTACTGCTGTCATCAAGCACATGTCTCCTGATATAGCCAAGATTCGGAAGCTTGTGAGACAGTCCAAATGCCTTCAGGACAAAATGACAGCAAAGGAGAGTGCAACATGGCTTGCCATCATCAACCAAGAGGAAGCCTTGGCTCGAGAGCTTTATCCTGATTATTGCCCCCCATTTTCCTCTGGTGGAGGTAATGGCTCCATGGTCATCAACGATTGCAGTGAGTATGATGTTGATGGTGCTGAGGAAGAACCAAACTTTGATGTGGAAGACCGGAAGCCAGATCCTCTTCATCCATCTAATCTTGGGATGGAGAGAATCACCGGAAGACTACCACTACAAATTTCTCATCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCTGGTGACTTCAACCTCATGATGGATCCCAAAATCTATACTTGTGAGCATCCTCAATGCCCTTACAATGAACCTCGCCTTGGTTTCCCTGACAGGTCGGCTAGGGACAATCATCAACTGAACTGTGCATACAGAAACAGTGCTTCAGATTATGGTGGTGGTTCCAACTTCCATGATTCTGAGGTTAAGCCAGTCATATTCCCTCAGTCTTTTGTTCAACCCAACACTAAATCTCAGGCTGCAAATGTGGTTCAACCTTCATTTGGTGTATCTGGGCTTGGAGTTCCGGAAGATGGGCAAAAAATGATAAATGACCTTATGACAATATATGACACAAATGTTATAGGAAACAATAACTTAAGTTCCAACAACTTTGTAGCCGCAGAAAATCATAACTTTTCTCAGACCATGTTACAGCAACAGCAACAGGACAGTCGTGGTGACAATTATTTCACTGGCCAAGGAATGGTGACAGAAGGAAATTACTTTGCACGTGAGGAAGGACAATTTGAGAGGTTCAAAGCCATGAACATGAACGCCCCTTTTGACACCAACCACATGTTGTTTAGCCCCCAGTGTGATTTGTCGTCTTTTGATTTTAAGGATATACAAGGGGGAGGAATGGATACCGGTCACAGACAGCAGCAAGAGGTTTCGATTTGGTTCCAGTGA 1830 0.4525 MMMFEDIGFCGDLDLLSCPLGDEDVVAVRQTDPDPVVEDDYSDEEIDVDELEKRMWRDKVRHKRLKEQQKAKEGTDAVKQRQSHEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEVWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPFSSGGGNGSMVINDCSEYDVDGAEEEPNFDVEDRKPDPLHPSNLGMERITGRLPLQISHPFKGDVVTNLDFIRKRKIPGDFNLMMDPKIYTCEHPQCPYNEPRLGFPDRSARDNHQLNCAYRNSASDYGGGSNFHDSEVKPVIFPQSFVQPNTKSQAANVVQPSFGVSGLGVPEDGQKMINDLMTIYDTNVIGNNNLSSNNFVAAENHNFSQTMLQQQQQDSRGDNYFTGQGMVTEGNYFAREEGQFERFKAMNMNAPFDTNHMLFSPQCDLSSFDFKDIQGGGMDTGHRQQQEVSIWFQ 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3355g00003 609 MobiDBLite consensus disorder prediction 67 93 - -
Vium3355g00003 609 FunFam Ethylene insensitive 3-like 1 169 306 - -
Vium3355g00003 609 MobiDBLite consensus disorder prediction 63 93 - -
Vium3355g00003 609 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Vium3355g00003 609 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 561 IPR006957 GO:0003700|GO:0005634
Vium3355g00003 609 FunFam Ethylene insensitive 3-like 1 81 159 - -
Vium3355g00003 609 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Vium3355g00003 609 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Vium3355g00003 609 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Vium3355g00003 609 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3355g00003 Vium-Chr3355 29135 32902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3355g00003 2 608 EIL Transcription Factor Family AT3G20770 57.846 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vium3355g00003 EIN3 1.7e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3355g00003 K14514 - gmx:100798037 1057.74