Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3347g00008 ATGTCTCCCATGTCAACTATTCCAATTCATAGACCTGAATTTGGGACCTTATTTTTCAATGGGTCTCCAAGCCCTTATAAATGTTTGAGAGTTGCCTCATCATGGACCATGGCCATGGATTCAAAATTTTCTCCGACAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAAGAAGGAAGAACTCTCTATGCAGCTTTCAACTCCACCCATTTCCAAAGTGGAAATTTTAAACTCCAACGATCTCCAATTTGATCGGTTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTGAGAGCAGAAAGTCACTGGGAGAATCGATCATATGAAAGATATGTTGATAACTTCAAAAGGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAGCTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAGAATGCAAAACACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAACATCCGATATTTGCTTCAAGGGGAGACTTACCCTGGGGAACGGGTAAAGGCTCCCCTTTTTTGCTGCATCAACAGAACACCACCAAGCAGATATGGTTACATTGCAAACTTGTGCGTTATCAAATCAGCTCGGCGCCAGGGAATTGCAAGCAACATGTTGTCATTTGCTATTGGAGCTGCAAAATCTAATGCAGGTGTGACACAGGTATATGTGCATGTGGACAAAAATAATAGTCATGCACAAATATTGTACCAAAAGATGGGTTTTGAGATGGTTGAAATGGCAAACTCCCAGTTGGTGGAACAAACATACTTACTGCGATTACAGACCTAA 912 0.4112 MSPMSTIPIHRPEFGTLFFNGSPSPYKCLRVASSWTMAMDSKFSPTKKNSINNDYSMKKKEELSMQLSTPPISKVEILNSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRSYERYVDNFKRKFAEQEFHALKRRCKVQNGDSCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPLFCCINRTPPSRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNAGVTQVYVHVDKNNSHAQILYQKMGFEMVEMANSQLVEQTYLLRLQT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3347g00008 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 302 - -
Vium3347g00008 303 Pfam Acetyltransferase (GNAT) family 148 282 IPR000182 GO:0016747
Vium3347g00008 303 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 216 286 IPR016181 -
Vium3347g00008 303 Gene3D - 108 303 - -
Vium3347g00008 303 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 213 303 IPR000182 GO:0016747
Vium3347g00008 303 CDD NAT_SF 213 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3347g00008 Vium-Chr3347 40226 43338 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3347g00008 Acetyltransf_1 5.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3347g00008 - - gmx:100795426 541.191