Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3347g00007 ATGTCTCCCATGTCAACTATTCCAATTCATAGACCTGAATTTGGGACCTTATTTTTCAATGGGTCTCCAAGCCCTTATAAATGTTTGAGAGTTGCCTCATCATGGACCATGGCCATGGATTCAAAATTTTCTCCGACAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAAGAAGGAAGAACTCTCTATGCAGCTTTCAACTCCACCCATTTCCAAAGTGGAAATTTTAAACTCCAACGATCTCCAATTTGATCGGTTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTGAGAGCAGAAAGTCACTGGGAGAATCGATCATATGAAAGATATGTTGATAACTTCAAAAGGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAGCTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAGAATGCAAAACACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAACATCCGATATTTGCTTCAAGGGGAGACTTACCCTGGGGAACGGGTAAAGGCTCCCCTTTTTTGCTGCATCAACAGAACACCACCAAGCAGATATGGTTACATTGCAAACTTGTGCGTTATCAAATCAGCTCGGCGCCAGGGAATTGCAAGCAACATGTTGTCATTTGCTATTGGAGCTGCAAAATCTAATGGTGTGACACAGGTATATGTGCATGTGGACAAAAATAATAGTCATGCACAAATATTGTACCAAAAGATGGGTTTTGAGATGGTTGAAATGGCAAACTCCCAGTTGGTGGAACAAACATACTTACTGCGATTACAGACCTAA 909 0.4103 MSPMSTIPIHRPEFGTLFFNGSPSPYKCLRVASSWTMAMDSKFSPTKKNSINNDYSMKKKEELSMQLSTPPISKVEILNSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRSYERYVDNFKRKFAEQEFHALKRRCKVQNGDSCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPLFCCINRTPPSRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNGVTQVYVHVDKNNSHAQILYQKMGFEMVEMANSQLVEQTYLLRLQT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3347g00007 302 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 216 285 IPR016181 -
Vium3347g00007 302 Pfam Acetyltransferase (GNAT) family 148 281 IPR000182 GO:0016747
Vium3347g00007 302 Gene3D - 113 296 - -
Vium3347g00007 302 CDD NAT_SF 213 264 - -
Vium3347g00007 302 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 213 302 IPR000182 GO:0016747
Vium3347g00007 302 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3347g00007 Vium-Chr3347 40226 43338 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3347g00007 Acetyltransf_1 2.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3347g00007 - - gmx:100795426 545.814