Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3347g00006 ATGTCTCCCATGTCAACTATTCCAATTCATAGACCTGAATTTGGGACCTTATTTTTCAATGGGTCTCCAAGCCCTTATAAATGTTTGAGAGTTGCCTCATCATGGACCATGGCCATGGATTCAAAATTTTCTCCGACAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAAGAAGGAAGAACTCTCTATGCAGCTTTCAACTCCACCCATTTCCAAAGTGGAAATTTTAAACTCCAACGATCTCCAATTTGATCGGTTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTGAGAGCAGAAAGTCACTGGGAGAATCGATCATATGAAAGATATGTTGATAACTTCAAAAGGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAGCTGCGCATGCATCATCACGGAACGGGTAAAGGCTCCCCTTTTTTGCTGCATCAACAGAACACCACCAAGCAGATATGGTTACATTGCAAACTTGTGCGTTATCAAATCAGCTCGGCGCCAGGGAATTGCAAGCAACATGTTGTCATTTGCTATTGGAGCTGCAAAATCTAATGCAGGTGTGACACAGGTATATGTGCATGTGGACAAAAATAATAGTCATGCACAAATATTGTACCAAAAGATGGGTTTTGAGATGGTTGAAATGGCAAACTCCCAGTTGGTGGAACAAACATACTTACTGCGATTACAGACCTAA 807 0.4102 MSPMSTIPIHRPEFGTLFFNGSPSPYKCLRVASSWTMAMDSKFSPTKKNSINNDYSMKKKEELSMQLSTPPISKVEILNSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRSYERYVDNFKRKFAEQEFHALKRRCKVQNGDSCACIITERVKAPLFCCINRTPPSRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNAGVTQVYVHVDKNNSHAQILYQKMGFEMVEMANSQLVEQTYLLRLQT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3347g00006 268 CDD NAT_SF 178 230 - -
Vium3347g00006 268 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 127 251 IPR016181 -
Vium3347g00006 268 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 170 - -
Vium3347g00006 268 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 113 268 IPR000182 GO:0016747
Vium3347g00006 268 Pfam Acetyltransferase (GNAT) family 157 247 IPR000182 GO:0016747
Vium3347g00006 268 Gene3D - 108 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3347g00006 Vium-Chr3347 40226 43340 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3347g00006 Acetyltransf_1 2.4e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3347g00006 - - gmx:100795426 455.292