Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium333g00013 ATGGCTCTTGTTTGGAATTTAGTCATCACTTTCGTAATTCTTGTTCTTCAACAACAATCTTGGATCCTTGTCGCCTTTGCCTCAAGCATTGTCCATATTGTGTATATGGGCGACAACAGAATAAAGCAGAGTGAGCAACACTTGGTTGAAGACTCCCACCTTGACATGCTATCTAGTATTCTCGGAAGCAAAGACGCTGCTAGGAAGTCCATCCTGTATAGCTATAGTCATGGCTTTTCTGGATTCGCTGCAGTTTTAAGTCAGCCCCAAGCTAGGCTCATTGCAGATTTCCCAGGGGTCGTCCGTGTAATTCCAAATAAAATTCTCAGTCTTCACACAACAAGAAGTTGGGACTTTTTGAACGTAAAGCAAGAAATAATAACCGGTGCTCTTTCTAGGGGTCAATCTGGAAGAGGAACCATCATCGGCATCATGGACACTGGTATTTGGCCAGAGTCTGAGAGCTTTAGAGATGAGCACATGGACAATCCTCCTTTTCACTGGCGTGGTATCTGCCAAGGAGGAGAAAGTTTTGATCACTCCAGTTGTAATAGGAAAATTATTGGTGCACGTTGGTACATTAAAGGATACGAAGCTGAAATTGGTAAACTAAATACAAGCGATGGGGTGGAGTACTTGTCTCCTCGAGATGCAGCAGGCCATGGCACTCACACATCATCTACTGCAGCTGGTGTTGCAGTGGAAAATGCAAGCTTTATGGGACTAGCTAAAGGGTTGGCAGGTGCTCCATCAGCTTGGTTAGCTGTGTACAAAATTTGTTGGTCTACTGGGGGATGCAGCTCTGCTGATATTCTTGCAGCTTTTGATGATGCAATATTTGATGGGGTTGACATTCTTTCAGCATCTCTTGGCTCAGATCCTCCACTTCCTACTTATGTTGAGGATGCACTGGCCATTGGTTCTTTTCATGCTGTTGCTAAAGGAATTTCTGTGGTATGTTCTGGTGGCAATTCTGGTCCATATTCCCAAACTGTCATAAACACTGCACCTTGGATTATTACTGTTGCAGCTAGTACCATAGACAGAGAATTTCCATCTAGGATTATCCTCGGAAACAATCAAACTCTAAAGGGTCAGAGTTTATATACAGGGAAAGATTTGAGCAAGTTTTATCCAATTGTTTTGGGAGAAGACATAGCATCATCGGATGCAGATGAAGAAAGCGCAAGGGGCTGCAATTCAGGGAGCCTGAATGCCACCTTAGCAAAAGGAAAAGCAATTCTGTGTTTTCAGTCTCGGTCACAGCGGTCAGCCACAGTTGCTATAAGAACAGTTACGGAAGCTGGTGGCTCTGGTCTCATATTTGCTCAGTTTCCCACTAAAGATGTTGATACATCATGGAGTACACCCTTTGTCCAAGTTGATTTTATCACGGGAACAACTATTCTATCATACATAGAAGCAACTAGGAATCCTGTAGTAAAGTTTGGCAAAACAAAAACAGTTGTTGGCCAACAGATATCACCAGAAGTGGCATTCTTCTCTTCGCGAGGACCAAGTTCTTTGTCTCCTTCAGTATTGAAGCCTGACATTGCTGCTCCTGGGGTTAATATTCTTGCGGCCTGGTCACCTGCTTCTTCTGCTGGGCGTTTGTTATATGATGCAAAATCAAAAAAGTTGCAGCCCCTTACCTTCAACTTTGAGTCAGGAACTTCCATGGCATGCCCTCACATTTCTGGTATTGTTGCACTTATAAAAACTGTCCATCCAACTTGGAGCCCCGCTGCAATTAAATCTGCCCTTGTCACAACAGCTTCTCTGAAAAAAGAATACGATCAATACATTTGGGCCGAGGGAGCACCACATAAACAAGCTGATCCATTTGACTACGGTGGTGGACATGTTGATCCTAACAAAGTGACAGATCCTGGTCTGGTATACGACATGAAAACCTCAGACTACATTCATTTCCTTTGTTCTATGGACTACAACGACACTGCCGTAAGCTCTTTAACAGGATCTCCTACCAAATGCCATAAATCACACAAATACCTCTTAAACATGAACCTCCCTTCTATCGTTATTCCTGAGCTGAAGCAACCCCTCACAGTTTCAAGAACAGTCACAAATGTTGGCCCAGTAAAATCTATCTACACCGCTCGTGTTGAACCTCCAATCGGCGTATCTGTCACAGTTGTGCCATCAACCTTGACATTTGGTCCAAAAAGAAAGAAAATGAAATTCAAGGTAACCTTTTCTTCCAAGCTACGAATTCAAAGCAGATTCTCATTTGGCTACCTCTTCTGGGAAGATGGGTTACATGATGTCAGAATGCCATTAGCAGTTCGCTCTGTTGTACAAGAATTTTGA 2331 0.4329 MALVWNLVITFVILVLQQQSWILVAFASSIVHIVYMGDNRIKQSEQHLVEDSHLDMLSSILGSKDAARKSILYSYSHGFSGFAAVLSQPQARLIADFPGVVRVIPNKILSLHTTRSWDFLNVKQEIITGALSRGQSGRGTIIGIMDTGIWPESESFRDEHMDNPPFHWRGICQGGESFDHSSCNRKIIGARWYIKGYEAEIGKLNTSDGVEYLSPRDAAGHGTHTSSTAAGVAVENASFMGLAKGLAGGXPSAWLAVYKICWSTGGCSSADILAAFDDAIFDGVDILSASLGSDPPLPTYVEDALAIGSFHAVAKGISVVCSGGNSGPYSQTVINTAPWIITVAASTIDREFPSRIILGNNQTLKGQSLYTGKDLSKFYPIVLGEDIASSDADEESARGCNSGSLNATLAKGKAILCFQSRSQRSATVAIRTVTEAGGSGLIFAQFPTKDVDTSWSTPFVQVDFITGTTILSYIEATRNPVVKFGKTKTVVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVNILAAWSPASSAGRLLYDAKSKKLQPLTFNFESGTSMACPHISGIVALIKTVHPTWSPAAIKSALVTTASLKKEYDQYIWAEGAPHKQADPFDYGGGHVDPNKVTDPGLVYDMKTSDYIHFLCSMDYNDTAVSSLTGSPTKCHKSHKYLLNMNLPSIVIPELKQPLTVSRTVTNVGPVKSIYTARVEPPIGVSVTVVPSTLTFGPKRKKMKFKVTFSSKLRIQSRFSFGYLFWEDGLHDVRMPLAVRSVVQEF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium333g00013 777 FunFam Subtilisin-like protease SBT1.5 139 359 - -
Vium333g00013 777 CDD PA_subtilisin_like 356 483 - -
Vium333g00013 777 SUPERFAMILY Subtilisin-like 111 633 IPR036852 GO:0004252|GO:0006508
Vium333g00013 777 CDD Peptidases_S8_3 111 594 IPR034197 -
Vium333g00013 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 770 IPR045051 -
Vium333g00013 777 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vium333g00013 777 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Vium333g00013 777 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vium333g00013 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Vium333g00013 777 Gene3D - 646 774 - -
Vium333g00013 777 FunFam subtilisin-like protease SBT1.5 349 491 - -
Vium333g00013 777 Pfam Subtilase family 137 593 IPR000209 GO:0006508|GO:0008236
Vium333g00013 777 Gene3D Peptidase S8/S53 domain 139 642 IPR036852 GO:0004252|GO:0006508
Vium333g00013 777 Gene3D - 349 491 - -
Vium333g00013 777 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Vium333g00013 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 112 IPR037045 -
Vium333g00013 777 FunFam Subtilisin-like protease SBT1.5 646 773 - -
Vium333g00013 777 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Vium333g00013 777 Pfam Fibronectin type-III domain 675 770 IPR041469 -
Vium333g00013 777 ProSiteProfiles Serine proteases, subtilase domain profile. 116 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium333g00013 Vium-Chr333 60049 65458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium333g00013 9 777 Subtilisin-like Serine Gene Family AT4G10540 47.066 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium333g00013 - - gmx:100775442 1351.65