Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3332g00051 ATGTCCACTGCGAGAGTTCAAGTTTCGGCGTGTGCGCTTTCCGCTGCCGTCAACAACCTCCGTCTCCGGCCAACCGCCGTCGTTTCCTTTACCAACCATTTCAGGAAGAAGTCTCTGAGGGTGGTGTCAATGTCGTCCGTTCCCCCTTCCCAACCCTTCGAAGTCGCCGTTAAAGCTTCCGTCACTACACCCAATAGGCTCGGCGACTGTCCCTTTTGCCAAAGGGTATTACTAACACTGGAAGAAAAACATCTACCTTATGAACCCAAGTTGGTGGATTTCACCAACAGACCAGAATGGTTCCTTAAAGCCAATCCTGATGGTAAAGTTCCTGTCATAAAGTTTGATGAGAAGTGGGTTCCGGATTCAGATGTTATCACTCAAACATTGGAAGAGAAGTATCCTATCCCACCATTGGTGACCCCACCCGAAAAGGCCACAGTAGGTTCAAAGATATTTTCTACATTTATTGGATTTCTCAAGAGCAAGGATCCCAATGATGGAACAGAACAAGCATTACTAAGTGAACTGAGATCTTTCAATGATTACATAAAGGAAAATGGCCCTTATATTAACGGTAATGAGATATCTGCAGCTGACCTATCACTTGGACCAAAGCTATACCATTTGGAGATTGCTCTGGGGCATTATAAGAAATGGACAGTACCTGATTCACTTACCTCTTTGAAGGCTTACACGAAGGCGATTTTCTCGAGGGAATCGTTCATTAAAACAAGTGCACAACCGCAGGATGTCATTGAAGGTTGGCGTCCTAAAGTAGAAGGCTAA 789 0.4512 MSTARVQVSACALSAAVNNLRLRPTAVVSFTNHFRKKSLRVVSMSSVPPSQPFEVAVKASVTTPNRLGDCPFCQRVLLTLEEKHLPYEPKLVDFTNRPEWFLKANPDGKVPVIKFDEKWVPDSDVITQTLEEKYPIPPLVTPPEKATVGSKIFSTFIGFLKSKDPNDGTEQALLSELRSFNDYIKENGPYINGNEISAADLSLGPKLYHLEIALGHYKKWTVPDSLTSLKAYTKAIFSRESFIKTSAQPQDVIEGWRPKVEG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3332g00051 262 FunFam Glutathione S-transferase DHAR3, chloroplastic 140 262 - -
Vium3332g00051 262 Pfam Glutathione S-transferase, N-terminal domain 69 137 IPR004045 -
Vium3332g00051 262 Gene3D Glutaredoxin 52 139 - -
Vium3332g00051 262 SFLD Main (cytGST) 69 237 - -
Vium3332g00051 262 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 52 259 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vium3332g00051 262 Gene3D - 140 262 - -
Vium3332g00051 262 CDD GST_N_family 70 131 - -
Vium3332g00051 262 SUPERFAMILY GST C-terminal domain-like 142 259 IPR036282 -
Vium3332g00051 262 CDD GST_C_DHAR 139 259 - -
Vium3332g00051 262 SUPERFAMILY Thioredoxin-like 69 135 IPR036249 -
Vium3332g00051 262 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 60 138 IPR004045 -
Vium3332g00051 262 FunFam Glutathione S-transferase DHAR3 chloroplastic 51 139 - -
Vium3332g00051 262 SFLD Glutathione Transferase (cytosolic) 69 237 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3332g00051 Vium-Chr3332 385177 390452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3332g00051 40 262 Glutathione S-transferase Gene Family AT5G16710 71.300 8.51e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3332g00051 K21888 - gmx:732557 471.085