Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3332g00044 ATGGCGAAAACGAAACAAACCCCTACTGTCTTGTTAACCTTATTCTCTCTGGCCACCTTCTTCGTTCTCTCTCTATCTTCTGCCGCGGATTTCTTCCTCTACGGCGGCTGCACGCAGCAACGGTACGCCTCCAACTCGCCCTACGAGTCAAACCTGAACTCTCTCCTCACCTCGCTGGTCAACTCGGCCACGTACTCCTCCTTCAACAAGCTCACCGTGGTGGGCTCCAGCCAGAGCGACGTCGTCCACGGCCTCTACCAGTGCCGTGGCGACCTCGCTATGCCGGAATGCGCTGCCTGCGTTACCCGGGCTGTCGCTCGAGCCGGCCAGCTCTGCCCTGCGGCGTGTGGCGGCGTGGTACAACTCGACGGGTGCCTCGTGAAGTACGACAACTCCACGTTCCTGGGCGTGGAGGACAAGACGGTGGTGCTGAAGAGGTGTGGGCCCTCCATGGGGTTGGGGTCGGGCACGACCGGCGAGAGGGATGCAGTACTGGGTGGCTTGGCGAGTTCGGGTGGGTATTTTCGGGTTGGCGGGTCGGGTGAGGTGAAGGGCGTGGCGCAGTGTTGTGGGGATTTGAGTTTTGCGGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGCTGCTGCCGAATATGGGGATATGTTCTTGGGGAAATGTTACGTCAGGTTTTCGACAAATGGGGCTCATGCATACAACAATAAAGCCCATGGAAAATCAGACAACGAAGGTGAAAAAACATTTGCAATAATTGTTGGATTATTAGCTGGAGTGGCCATACTCATTATTTTCCTTGCTTTCTTGAGAAGGATGTGTGAGGGACACGGTAAATAA 852 0.561 MAKTKQTPTVLLTLFSLATFFVLSLSSAADFFLYGGCTQQRYASNSPYESNLNSLLTSLVNSATYSSFNKLTVVGSSQSDVVHGLYQCRGDLAMPECAACVTRAVARAGQLCPAACGGVVQLDGCLVKYDNSTFLGVEDKTVVLKRCGPSMGLGSGTTGERDAVLGGLASSGGYFRVGGSGEVKGVAQCCGDLSFAECQDCVGDAIRRLRSECAAAEYGDMFLGKCYVRFSTNGAHAYNNKAHGKSDNEGEKTFAIIVGLLAGVAILIIFLAFLRRMCEGHGK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3332g00044 283 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
Vium3332g00044 283 Gene3D - 161 234 IPR038408 -
Vium3332g00044 283 Gene3D - 29 134 IPR038408 -
Vium3332g00044 283 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Vium3332g00044 283 Pfam Salt stress response/antifungal 179 232 IPR002902 -
Vium3332g00044 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 278 - -
Vium3332g00044 283 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Vium3332g00044 283 FunFam cysteine-rich repeat secretory protein 3 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3332g00044 Vium-Chr3332 307824 309309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3332g00044 11 230 Pollen Coat Proteome AT4G20670 24.066 1.40e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3332g00044 - - gmx:100811615 475.322