Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3325g00002 ATGGAGGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTCAAAGCAAGAATTACATGCTACAAACAAGATTGGAGCAGTGGATTCCAAGCAGGAATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGCGAGCAACTCGAGAGAAATACTGATGGAACTCTCACTGCTGTTCAAACTCTTGCATCAACTGCACTCTGTGGAGTTATCCACTCAATCATTGGAGGCCAGCCTCTGCTCATACTCGGCGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTATAACTTTGCTAAGGATCGTGAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTTTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAATAGATTCACACGTGTTGCTGGCGAATTATTTGGTCTGTTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTGCCTAAGAACCAGAGAGAAGGTACCAATCAGATTGCCCTCCAGTCATCTTGGTTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACAAAGCCGCAAAGCTAGATCCTGGCGTTACGGGTCAGGTTGGCTAAGGGGATTCATAGCTGATTATGGAGTCCCTCTAATGGTTCTGATATGGACTGCTGTGTCTTACATACCAGTCAATAAGGTTCCAAGGGGAGTCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCCGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCCATCCTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTCGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCGTCATCTTATCATTATGATTTGCTGCTCTTGGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCTAATGGTGTGATTCCTCAATCTCCAATGCACACGAAGAGCTTAGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGAGGAGGAATGTTAACTTGAGCCAGTTGTACCAAAATATGAAAGAAGCATATGATGAAATGCAGACTCCATTGGTTCCCCAAATGCCACCTACCTTGGGGCTGAAAGAACTGAAGGAGTCTACTATTGAACTGGCTTCAAGTCATGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTCGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAACGTCTAAGCAATCTGCTTCAGGCATTGATGGTTGCAGCTTGTGTTGCTGCCATGCCCCTTTTGAAGAAGATACCCACTTCAGTGCTTTGGGGCTACTTTGCCTTTATGGCCATTGAAAGCTTACCAGGAAATCAGTTTTGGGAGCGAATCTTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAATACCATGCCACCTTTGTTGAGACGGTTCCCTTCAAAACAGTTGCTATGTTTACTGTGTTCCAGACAGTGTACTTGCTTCTCTGCTTTGGCTTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCACTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTGCCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAGGAGCTCGATGCAGCAGCATATGAAGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGGTCAAGGTGGACAAGCACCAACAGTAAATATTAGTGGTGGGGAAATTCTTGATGAAGTTATTACTCGGAGTCGTGGAGAGATTCGACGCACACAAAGCCCGAAAACAACAAGTTCAACACCAACTTCAACCGGAGATATAAGACCAGCTAGTAGCCCTCGGATAGGAAGAAGCATTCCTAGCCCTCGAGTGACTGAATTGAGAGGGGAAAGCAGTCTGAGACCACCTGGGAAGGAGATCAAGTTAGTACAAACACCTAGTCCACGCTCACCAGTTCTTGGAAAAGTTACCAAAGGTTCACCTTCAAGCTAA 2169 0.4408 MEETFVPFRGIKNDLKARITCYKQDWSSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGVIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFGVPKNQREGTNQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGSGWLRGFIADYGVPLMVLIWTAVSYIPVNKVPRGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPILYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQNMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSHGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTVFQTVYLLLCFGLTWIPIAGVLFPLLIMLLVPVRQYCLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGQGGQAPTVNISGGEILDEVITRSRGEIRRTQSPKTTSSTPTSTGDIRPASSPRIGRSIPSPRVTELRGESSLRPPGKEIKLVQTPSPRSPVLGKVTKGSPSS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3325g00002 722 MobiDBLite consensus disorder prediction 642 722 - -
Vium3325g00002 722 MobiDBLite consensus disorder prediction 650 668 - -
Vium3325g00002 722 FunFam probable boron transporter 2 18 60 - -
Vium3325g00002 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vium3325g00002 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Vium3325g00002 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Vium3325g00002 722 Gene3D Helical hairpin bin 18 60 - -
Vium3325g00002 722 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3325g00002 Vium-Chr3325 39433 45198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3325g00002 1 697 Antiporters AT3G62270 75.321 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3325g00002 K24194 - gmx:100793554 1331.62