Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3314g00019 ATGTCCTTCACTCTAGTATTAAAAAGCCAAGCCACTAACAACCAACATAACAAAGCAGATAAGAAGCAAACCCAACCCAGACCCTGCTCTCTCTGCACCACTGTGTCTGTGTGCTGTGTGTGCTGTGTGTGCTGTGTCCACACCAAGGAGATACAGAAACCAACCAAGCAACATTTTCCCTCTTCTTGTCTTCTCTCAACTACAAAAACCATACCATTTATTATGGACGCCCTCTTCTCCTCCCTCTCCTTCCTCTTCCTTCTCTTCCTCCTCAAGCTCACCGTCCTCCTCTGGTGGCGACCCAGAAAAATTCAAGGTCACTTCTCCAAGCAAGGCATCCGAGGACCCCCTTATCGTTTCTTCATTGGCAACGTTAAGGAACTTGTCGCCATGATGTTGAAGGCCTCCTCCAAACCCATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTTCGTCTCACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCCCTCGTGAAGCAGCTGGAAGGCGATGGCCTCCTCAGCCTCAAAGGAGAAAAATGGGCTCACCATCGAAGGATTATCTCTCCCACTTTTCACATGGAGAATCTAAAATTGTTGATACCGGTGATGGCTACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAGAGGCTGACAGAAGACGTGATTACGAGGACGGCATTCGGAAGCAGCTACGAAGACGGGAAAGCCATTTTCCGGTTACAGGGTCAGCAGATGGACTTGGCTGCCGACGCCTTCCAGAAAGTATTCATTCCAGGTTACAGATTTGTACCCACAAGGAGGAACATAAAGTCGTGGAAGTTGGAGAAGGAGATAAAGAAATCGCTGGTGAAACTGATAGAGCGACGGAGGGAGAATTCGGAGAAGGTGGTGGAGAAGGGGGCGAAGGATTTGTTGGGGCTAATGATTGAGGCGTCCAACACGAATTCGACGAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACAGTGGCAGGTACGGGCACGTGAGGAGGTTCTGAAGATGTGTGGATCACGTGACCTTCCGACCAAAGACCATGTCGCAAAGCTGAGGACGGTGAGCATGATTGTGAACGAGTCGCTAAGGCTGTACCCGCCGACGATCGCCACAATCAGACGTGCCAAGACGGACGTGGAGTTGGGGGGGTACAAGATACCACGTGGGACGGAACTGCTGGTTCCAATCCTGGCCGTTCATCACGATCAGGCCATATGGGGAAACGATGCGAACGAGTTCAATCCTGGGCGTTTCAGCCAGGGGGTGGCCCGCGCCGCGAACCATCCTCTGGCCTTCATACCCTTTGGAGTGGGTGTGCGCACATGCATAGGACAAAACCTGGCAGTGCTACAAACCAAACTGGCCCTCGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTCATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACGTTTCTCCACTCCTCCGCCTCCTCAACCATCCTCCTCCTCTCCTCCTCCTCCTACTCTTCTCAACGCAACTGTATAG 1815 0.5107 MSFTLVLKSQATNNQHNKADKKQTQPRPCSLCTTVSVCCVCCVCCVHTKEIQKPTKQHFPSSCLLSTTKTIPFIMDALFSSLSFLFLLFLLKLTVLLWWRPRKIQGHFSKQGIRGPPYRFFIGNVKELVAMMLKASSKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQRLTEDVITRTAFGSSYEDGKAIFRLQGQQMDLAADAFQKVFIPGYRFVPTRRNIKSWKLEKEIKKSLVKLIERRRENSEKVVEKGAKDLLGLMIEASNTNSTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVRAREEVLKMCGSRDLPTKDHVAKLRTVSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLVPILAVHHDQAIWGNDANEFNPGRFSQGVARAANHPLAFIPFGVGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQRFSTPPPPQPSSSSPPPPTLLNATV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3314g00019 604 PRINTS E-class P450 group I signature 379 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS E-class P450 group I signature 273 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS E-class P450 group I signature 399 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS E-class P450 group I signature 158 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 SUPERFAMILY Cytochrome P450 108 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 Gene3D Cytochrome P450 98 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS P450 superfamily signature 390 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 MobiDBLite consensus disorder prediction 583 604 - -
Vium3314g00019 604 FunFam Cytochrome P450 734A1 98 582 - -
Vium3314g00019 604 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Vium3314g00019 604 Pfam Cytochrome P450 151 561 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3314g00019 604 CDD CYP734 151 575 - -
Vium3314g00019 604 PANTHER CYTOCHROME P450 FAMILY MEMBER 91 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3314g00019 Vium-Chr3314 215276 221783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3314g00019 82 583 Cytochrome P450 AT2G26710 77.559 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3314g00019 K15639 - gmx:100780027 917.146