LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium3314g00015	ATGTTGGGCTGCGGCCAAGAAGAGATTGAACTGTCACGGGATGGCAGCCACTACAGTCTCTCCACCGGAATACTTCCGTCTCTCGGGGCCAAAAGCAACCGTAGAATCAAGCTGCGCCGCTTTATTCTATCGCCCTACGGCCGCCGTTACAGGATATGGGAAACTTTCCTTATTATTCTGGTATTTTATACTGCCTGGGTTTCTCCCTTCGAATTCGGATTCTTGAAGAAGCCAGAACCACCGCTTTCCATTTCGGACAATATTGTGAATGGATTTTTTTTCGTGGATATAGTTCTGACCTTCTTTGTGGCTTACATTGACAAAACCACCTATTTGATCGTGGATGATCGGAAACAGATTGCTTGGAAATATGCAAGGACTTGGCTGGCCTTCGATGTTGTCTCCATCATTCCTTCAGAGCTTATACAAAAGTTATCACCTTCTCCTCTTCAATCTTACGGTTTATTCAATATGCTTCGCCTATGGCGTCTTCGGAGAGTCAGTGCTTTGTTTTCTCGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCCAAGCTTATTTCTGTTACTCTCTTCGCTGTTCATTGTGCTGGGTGTTTCTATTATCTTATTGCTGCACGTTATCATGATCCAAAAAAGACGTGGATTGGTTCAACGATGGATAATTTCCTTGAACATAGTTTGTGGTCAAGATACGTGATGTCTATTTACTGGTCTATTACTACCTTAACAACTGTCGGTTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGACCTTTGACATTTTCTATATGCTCTTTAATCTGGGGTTAACAGCGTATTTGATTGGTAATATGACCAACTTGGTTGTCCACGGCACAAGTCGAACCAGAAAATTTAGAGATACCATCCAAGCTGCCTCAAATTTTGCCCAAAGGAATCAATTGCCTCATCGGTTGCAAGACCAAATGCTTGCCCACTTATGTTTGAAGTATAGAACAGACTCGGAAGGGTTGCAGCAGCAAGAGACACTTGATTCTCTTCCTAAGGCCATCAGATCCAGCATTTCACATTATCTTTTCAATTCTCTGATTGATAAGGTCTACTTGTTTAAGGAGGTTTCGAATGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCTGAATATTTTCCACCCAAAGAAGATGTTATCTTGCAAAACGAAGCCCCCACTGACTTTTATATACTGGTCACTGGTGCCGTGGAACTGGTAGTTCTTAAAAATGGGGTTGAACAGGTTGTTGGAGAGGCCAAAACTGGTGATCTTTGTGGTGAGATAGGTGTGCTCTGTTACAAGCCACAGCTTTTCACTGTTCGAACGAAGCGACTAAGCCAGTTGCTGAGGCTAAATCGTACTACTTTCCTGAATATTGTTCAGGCCAACGTGGGGGACGGAACCATTATCATGAATAATCTGCTTCAGCATTTGAAAGAGCTCAACGATCCAATCATGGAGGGAGTTTTGGTGGAGATTGAGAACATGCTAGCTCGTGGTAGAATGGACCTACCAGTGAGTGTGTGCTTTGCGGCAGCAAGAGGTGATGACTTGTTGTTACATCAGTTGCTGAAACGAGGAATGGATCCAAACGAATCCGACAACAATCGAAGGACAGCTTTGCATATAGCAGCATCTCAAGGGAAAGAAAACTGTGTTCTGCTTCTGTTAGATTATGGGGCGGATCCCAACATTACAGATTTGGACGGTAATGTGGCACTATGGGAGGCTATGGTGGGAGGACATGAGTCAGTGAGGAAGGTGTTGGCAGAAAATGGAGCTAACTTGCAAGGTGGGGATGTGGGCCAGTTTGCATGTACCGCTGTTGAGCAGAACAGTTTGAAGTTGCTGAAGGAAATAAGGCGCTACGGAGGAGATATCACCCTTCCAAGCATCAACAGTGGGACCACAGCCTTGCACGTTGCAGTGTCGGAGGGGAACGTTGAAATTGTGAAATACCTTTTGGATCACGGGGCAAGCATTGACAAGCCGGACAAGCACGGCTGGACCGCTAGAGGTCTGGCAGATCAGCAATCTCATACAGAAATAAAAGCCATTTTTGACTCCATTGGGGACCAGGTTCAGTCTTTCGTTACCATTCCCGAGAAGCAGAGTGGGTTCAGGTTCCTTGGAAGGTTTACTAGTGAGCCAACCATGCCTTCACCCCTTGACGGCTCATTTCATGGAACGGATGCCTCTTGGAGCCAGAGCCAGAACCGTCCAAGGCGTAGGAGCAGCAATTATCATAATTCACTCTTAGGGATGATGGCAGCAGCACATAATGGGGAAAAGGACCTGCTTTTGACTCTTGACATGAATAACAAGGCAAGCAATGTCATGAAGAGTAGTAATGCAGGTAGTCCAGCTAGAGTGATTATTAGTTGCCCTGAAAAGGGTGAGGTTGTGGGGAAGCTTGTTTTACTACCTGGAAGCTTTCAAGAGCTGCTTGAGATTGGAGCCAAAAAATTTGGTGTCTATCCTGCCAAGGTTTTATGCAAAGATGGAGGTCAAATTGAAGATTTAGAGGTTATTAGAGATGGTGACCATCTGGTCTTTGTCTGTGCTGGTGGGGTTGTAGAATCCAAGTGTCCAACTCCAGCACCACTTTAG	2640	0.4492	MLGCGQEEIELSRDGSHYSLSTGILPSLGAKSNRRIKLRRFILSPYGRRYRIWETFLIILVFYTAWVSPFEFGFLKKPEPPLSISDNIVNGFFFVDIVLTFFVAYIDKTTYLIVDDRKQIAWKYARTWLAFDVVSIIPSELIQKLSPSPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLISVTLFAVHCAGCFYYLIAARYHDPKKTWIGSTMDNFLEHSLWSRYVMSIYWSITTLTTVGYGDLHPVNSREMTFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPHRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFNSLIDKVYLFKEVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELVVLKNGVEQVVGEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMEGVLVEIENMLARGRMDLPVSVCFAAARGDDLLLHQLLKRGMDPNESDNNRRTALHIAASQGKENCVLLLLDYGADPNITDLDGNVALWEAMVGGHESVRKVLAENGANLQGGDVGQFACTAVEQNSLKLLKEIRRYGGDITLPSINSGTTALHVAVSEGNVEIVKYLLDHGASIDKPDKHGWTARGLADQQSHTEIKAIFDSIGDQVQSFVTIPEKQSGFRFLGRFTSEPTMPSPLDGSFHGTDASWSQSQNRPRRRSSNYHNSLLGMMAAAHNGEKDLLLTLDMNNKASNVMKSSNAGSPARVIISCPEKGEVVGKLVLLPGSFQELLEIGAKKFGVYPAKVLCKDGGQIEDLEVIRDGDHLVFVCAGGVVESKCPTPAPL	879

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium3314g00015	879	Gene3D	-	52	289	-	-
	Vium3314g00015	879	SUPERFAMILY	cAMP-binding domain-like	293	488	IPR018490	-
	Vium3314g00015	879	MobiDBLite	consensus disorder prediction	738	757	-	-
	Vium3314g00015	879	SUPERFAMILY	Voltage-gated potassium channels	45	289	-	-
	Vium3314g00015	879	FunFam	Potassium channel KAT2	356	492	-	-
	Vium3314g00015	879	PANTHER	POTASSIUM CHANNEL AKT1	16	863	IPR045319	GO:0005249\|GO:0006813
	Vium3314g00015	879	CDD	CAP_ED	368	473	IPR000595	-
	Vium3314g00015	879	PRINTS	EAG/ELK/ERG potassium channel family signature	236	253	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Vium3314g00015	879	PRINTS	EAG/ELK/ERG potassium channel family signature	262	273	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Vium3314g00015	879	PRINTS	EAG/ELK/ERG potassium channel family signature	86	96	IPR003938	GO:0005249\|GO:0006813\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium3314g00015	Vium-Chr3314	132381	138858	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium3314g00015	10	862	Ion Channels	AT2G25600	62.702	0.0	1086

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium3314g00015	K21867		-	gmx:100819491	1565.82

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