Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3313g00004 ATGATGACAATGAAGCTGCTTTTGGTAGCCGTTGAACTTGCATGCTTTGTTTCTGGGATCTTCTCCTTCGGATCTCAGACACTGTCTCAGCTTTCTTTCTTAGAAAACGGTGTCGTCTCCACTCGCCCTTCCTCAACTCAACCTCAACCTCTTATGGTCGACCTCACTCTCATTCAAGAAGCTCATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTGTTCATTTGGAGGGGGGAGGATGGTTTGATACCATCAGAAATTGTGTCTATAGAAAAAATACTCGTCGTGGTTCCTCAAAGTTCATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTACTGTGATGGGGCGTCTTTCAGTGGAGATGCCGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAGAATATGGCTAGCTGCAATGGAGGAATTAATGTCGAAAGGAATGCAGAAAGCCAACCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCAGGAGCTTATTTCCAGAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTCTTTCTTGATGCAATTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTTGTTCAGTTGCAGGATGTACAAAAAAACCTTCCAAAAAGTTGTCTCAACCAACTAGACCCGACTTCGTGCTTCTTTCCTCAGAATTTGATCGATCATATTGAAACCCCATTGTTTCTACTCAACACAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCACCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCACAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTACAGACTTCTCTAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGACGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTAGCTGTTGGAGACTGGTATTTTGACCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1257 0.4352 MMTMKLLLVAVELACFVSGIFSFGSQTLSQLSFLENGVVSTRPSSTQPQPLMVDLTLIQEAHSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWFDTIRNCVYRKNTRRGSSKFMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDAEDESAQLQFRGQRIWLAAMEELMSKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQDVQKNLPKSCLNQLDPTSCFFPQNLIDHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDITDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3313g00004 418 PANTHER NOTUM-RELATED 19 412 IPR004963 GO:0016787
Vium3313g00004 418 Pfam Pectinacetylesterase 47 396 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3313g00004 Vium-Chr3313 47478 55638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3313g00004 7 417 Carbohydrate Esterase AT3G62060 65.714 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3313g00004 K19882 - gmx:100786972 786.563