Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium330g00003 ATGGAGGATAGGATGAAGAAGACGGTGCTTTCTCCACCCATTGTGCTTCTCTTTCTAGCTTTCTCACTTCTTCTCTTGCTTCCAGAAGCTTCGGCTACAAAGTTTAACGTTGGAGATAGCAAGTTTTGGAACCCCAATATCAACTACACTGAATGGGCCAAAGGAAAACATTTCTACCTTGGAGATTGGCTGTATTTTGTTTACGACAGGAACCAAGCTAGCGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAACTCTGATCATCCACTCACAAACTGGACAAGGGGTGCAGGAAGAGATGTGGTTCCTCTAAACGTAACCAAAACCTACTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTTGAAAAGCTACCACCTCCGCCGAAAGCCGCCCCTGTAAAATCCGGCGCACCAACACTCTTCTCCACCGGCCACATTCTTCTCACGCCTGTTGTTTTTGCCGTCGGAGCAGCGTGGGATGCATTCATTCATTTCTGGTAG 531 0.4727 MEDRMKKTVLSPPIVLLFLAFSLLLLLPEASATKFNVGDSKFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQASVLEVNKTDYETCNSDHPLTNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKSGAPTLFSTGHILLTPVVFAVGAAWDAFIHFW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium330g00003 176 PANTHER BLUE COPPER PROTEIN 32 138 IPR039391 GO:0009055
Vium330g00003 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Vium330g00003 176 Gene3D - 31 134 IPR008972 -
Vium330g00003 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Vium330g00003 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Vium330g00003 176 FunFam Lamin-like protein 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium330g00003 Vium-Chr330 17126 19575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium330g00003 14 176 Phytocyanin Superfamily AT5G15350 58.788 1.06e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium330g00003 - - gmx:100305564 297.745