Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium328g00009 ATGATTCAGCTCTCTTGTGCCGTTCTGAGTCACCGGCATATTGGAGGAAGTCTCCGGCAGATTGGAGGAACTCTGGAAGTAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGCAGGTCTCGCATGCGAAAGAAACAACAGATTGAAGTCCTGCAGTATCACGTGGATCATCTGCAGACACTAAACCATCAACTCTCCCAAAAGATCATTTACTTGCTTGAATGTAACCAACAAATCCACCAACAGAATTCTCAGCTAAAAGAAAAAGTTTCCTCTCTTCAGGTAGTACTCTCTGACTTGTTGGTTCCTGCAGCCGGTGCAGAACAACCTCACCACATCCCTAATGGCTTCCTAGCCGAGCCTTCTTCAACTAGACCAATTTCAAGTTCCCGAACATAG 405 0.4543 MIQLSCAVLSHRHIGGSLRQIGGTLEVKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQNSQLKEKVSSLQVVLSDLLVPAAGAEQPHHIPNGFLAEPSSTRPISSSRT 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium328g00009 134 FunFam BZIP transcription factor 25 76 - -
Vium328g00009 134 SUPERFAMILY Leucine zipper domain 28 78 IPR046347 GO:0003700|GO:0006355
Vium328g00009 134 Gene3D - 26 101 - -
Vium328g00009 134 Pfam bZIP transcription factor 28 85 IPR004827 GO:0003700|GO:0006355
Vium328g00009 134 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Vium328g00009 134 CDD bZIP_plant_GBF1 28 76 IPR045314 GO:0003700|GO:0006355
Vium328g00009 134 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 26 111 IPR044521 -
Vium328g00009 134 SMART brlzneu 22 87 IPR004827 GO:0003700|GO:0006355
Vium328g00009 134 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 88 IPR004827 GO:0003700|GO:0006355
Vium328g00009 134 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium328g00009 Vium-Chr328 66827 70422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium328g00009 26 131 bZIP Transcription Factor Family AT5G60830 55.140 1.19e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium328g00009 bZIP_1 6.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium328g00009 - - aprc:113874797 177.563