Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3286g00008 ATGGTCAACCAGAAGAAGCTAGTTGATGAAGTGTCGGGTTGGCTTAGAGTCTACGATGACGGTTCGGTAGACCGAACATGGACCGGTCCACCAGAGGTCAAATTAATGGTCGAACCGGTTCCTGCCCACCACGAATTCATCAATGGAGTTGCTGTTCGTGATACTGTCACGAACAACAATCTCCGAGTACGACTTTACATGCCGGAGAAAGTCTCTAACGAGGAGAAGCTTCCCCTTTTTCTTCACTTTCATGGTGGCGGGTTTTGCATAAGTGAACCGGATTGGTTCATGTACTATCAGTTTTACTCACAACTTGCTAGATTAGCTCGAATCATCGTTGTGTCTTGTTTTCTTCGCCGTGCTCCAGAAAATCGTCTTCCTGCAGCAATCGACGACGGGTTTTCTGCTCTTCTCTGGCTACAGGATGTAGCTGGAAGAGAAACGGAAGAGCCGTGGCTTGAAAAACACGGTGATTTTCGTCGTGTTTTTCTGATCGGAGATAGCTCCGGTGCAAATATTGTGCATGAAGTGGCAGCTCGAGCTGGGAAGACACAACTGAAGCTGATAAGCGTAGCTGGAGGAATCCCTATTCATCCGGGGATGATGAGGTCGACACGGAGCAGGTCAGAGTTGGAAAAACCACAATCTCCATTTTTGACTTTGGACATGGTGGATAAGTTCATGAGCTTGGCATTGCCATTGGGTTCAACCAAGGACCACCCCATTGCGTGCCCCATGGGTGACAGCGCTCCGCCGCTGAGCGGGCTGAAACTGCCGCCGTTTCTGCTGTGCCTGGCGGAGATGGACTTGATCTTTGACACTGAGATGGAGTACTACGAAGCCATGCGGAAGGCCAACAAGGATGTGGAGTTGTTTGTTAACGAAGGAGTGACTCATAGTTTCTATCTCAACAAAATTGCAGTGGACATGGACCCAAATACCGGTGCTCAAACGCATGCTCTTATGGCTAGAATCAAACAGTTAGTTGAAGAGCACTAA 999 0.4875 MVNQKKLVDEVSGWLRVYDDGSVDRTWTGPPEVKLMVEPVPAHHEFINGVAVRDTVTNNNLRVRLYMPEKVSNEEKLPLFLHFHGGGFCISEPDWFMYYQFYSQLARLARIIVVSCFLRRAPENRLPAAIDDGFSALLWLQDVAGRETEEPWLEKHGDFRRVFLIGDSSGANIVHEVAARAGKTQLKLISVAGGIPIHPGMMRSTRSRSELEKPQSPFLTLDMVDKFMSLALPLGSTKDHPIACPMGDSAPPLSGLKLPPFLLCLAEMDLIFDTEMEYYEAMRKANKDVELFVNEGVTHSFYLNKIAVDMDPNTGAQTHALMARIKQLVEEH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3286g00008 332 SUPERFAMILY alpha/beta-Hydrolases 7 306 IPR029058 -
Vium3286g00008 332 Gene3D alpha/beta hydrolase 5 330 IPR029058 -
Vium3286g00008 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Vium3286g00008 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3286g00008 Vium-Chr3286 83370 84540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3286g00008 7 330 Carbohydrate Esterase AT5G16080 35.736 1.28e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3286g00008 - - gmx:100805462 568.926