Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3281g00023 ATGGCTTCCCACATTGCTCTTCTTCGAGCCCCTCCTCTTTCAATTTCTACTCAACGCTTCCATGCAAAGCAAAGTTGCATAAACGGGCTCAAATTCCCCACTACCACCACCACTTCTTCTTCTTCTTCTTCTTCTTGCCTTCCATGCTCCATAACGACACAGAGAGGGTCTTTTTCCTCAGTCATTGCTTCTTCCTCTTCAAATGGAAGGGACCCGGGTTCGGTGGATGATGAAGAGGTACGAAAGGAACTCATTGACGAAGAGAAACGACGAGCTGCATTGTCTGCGAGGATTGCCTCAGGGGAATTCACCGTGAGGCAGAAATCTCTTTTTCTTTCTACGCTGGAGGGATTGGCAAAGCTGGGGGTGCCCAATGAAATTCTGGAGTTTTTGTTTGGTTGGGTTGAAGGGGATGGTGTGTACGCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTCTTCATTCCCTTGTATGAACTTTACCTTACATATGGTGGGATTTTTAGGTTGACGTTTGGACCAAAGTCCTTTCTGATAGTATCTGACCCGACTATTGCAAAACACATATTGAAAGACAATTCAAAGGCTTATTCAAAGGGCATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAAATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTGCACCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCCGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCCGATGGAGAAGACGCTGAGATGGAATCACTTTTCTCACGATTGACCTTGGATATCATTGGAAAAGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACCGGTATAGTTGGGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTATTTCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATATATCACCACGTTTAAGGAAGGTTAATGAAGCTCTCAAATTGATCAACGATACGCTTGATGATCTGATAGCAATATGCAAGAGAATAGTGGATGAAGAAGAGTTACAGTTTCATGAAGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTAGCATCAGGAGATGATGTATCAAGTAAGCAACTTCGTGACGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTACTATCCAAGGAGCCTAGAGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATAGACATCCAACTATTGAAGACATGAAGAAACTCAAATATACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCGCAACCACCTGTATTGATTCGTCGCTCTATTGATAATGATGTTCTTGGAGAGTACCCTATAAAGAGAGGTGAAGATATATTTATATCTGTCTGGAACCTGCATCGCAGTCCAAAATTGTGGGATGATGCTGACAAGTTTGAGCCTGAAAGATGGCCATTAGATGGACCAAATCCTAACGAGACTAATCAAAGCTTCAAATATCTTCCGTTTGGAGGAGGACCACGGAAATGTGTAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCTCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCTCCACCTGTTGATATGACTACTGGAGCTACAATTCATACTACACAAGGCTTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTACCATCATTACAGATGTCAACTTTGGAAGTGGATCCATCCGTAAGCCTTTCTGATCAGGATGAAATAAGTCAGAAAGGACAAGTTTATCAGGCTCAGGCTCAGCCCTAG 1926 0.4289 MASHIALLRAPPLSISTQRFHAKQSCINGLKFPTTTTTSSSSSSSCLPCSITTQRGSFSSVIASSSSNGRDPGSVDDEEVRKELIDEEKRRAALSARIASGEFTVRQKSLFLSTLEGLAKLGVPNEILEFLFGWVEGDGVYAKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILKDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVGAVYTVLREAEDRSISPIPVWDIPIWKDISPRLRKVNEALKLINDTLDDLIAICKRIVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMSKLQEEVDSVLGDRHPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSIDNDVLGEYPIKRGEDIFISVWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQSFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAVGAPPVDMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSVSLSDQDEISQKGQVYQAQAQP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3281g00023 641 PANTHER CYTOCHROME P450 FAMILY 4 163 600 - -
Vium3281g00023 641 MobiDBLite consensus disorder prediction 617 641 - -
Vium3281g00023 641 Gene3D Cytochrome P450 147 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 540 549 IPR017972 GO:0005506|GO:0016705
Vium3281g00023 641 FunFam Carotene epsilon-monooxygenase, chloroplastic 145 602 - -
Vium3281g00023 641 CDD CYP97 161 594 - -
Vium3281g00023 641 PRINTS E-class P450 group I signature 499 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 417 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 547 570 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 537 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 167 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 397 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS E-class P450 group I signature 459 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 SUPERFAMILY Cytochrome P450 158 600 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS P450 superfamily signature 538 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS P450 superfamily signature 547 558 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 PRINTS P450 superfamily signature 408 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3281g00023 641 Pfam Cytochrome P450 165 584 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3281g00023 Vium-Chr3281 241893 247747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3281g00023 69 623 Cytochrome P450 AT1G31800 80.036 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3281g00023 K15747 - gmx:100780770 1139.41