LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium3281g00014	ATGAGGGAGCCAATGGCTAACTTTGTGATTCCACTTCCTTTCATGCTCTTCATTACTCGTTGGTTTCTGTTGGCTCATCATGACAGTGCTGCAGAGACTTCCACATACATAGTACACATGGACAGATCCCTTTTTCCCACTGTCTTTTCAACGCATCATGATTGGTTTGAATCCTCCGTTCAGTCCATAAAATCAGCAACACCTGGTCACTCATTCAAGCAATCACAGAAACAGATAGTGTATTCCTATAACCATGCCATGTATGGTTTTAGTGCAGTGCTAACCTCAGAAGAGTTAGAGGCTCTCAAGAACTCTCGTGGTTTTGTTGCGGCATATCCAGACAGAAATGTCACCGTAGACACCACTCACACTTTTGAGTTTCTCTCCCTAGCCTCTTCCAGTGGCCTCTGGCACGCTTCCAATTTGGGGGAGGATGTCATTGTGGGTGTTATTGACTCTGGTGTGTGGCCTGAGAGTGAAAGCTTCAAAGATGATGGCATGACCAAGAAAATTCCAAGTAAATGGAAAGGAACCTGTCAGGAAGGGCAAGACTTCAACTCTTCCATGTGCAACTTCAAACTGATCGGAGCTAGATATTTCAACAAAGGAGTGATTGCTGCAAAACCCAAGGCTAGAATCACTATGAACTCAGCCAGAGATACAGAGGGTCATGGAACTCACACATCTTCCACAGTTGCTGGCAACTACGTCAGTGGAGCCTCTTACTTTGGCTATGCCAAAGGGGTGGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGAAGAGGGTCGTTACTCCTCTGATGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGGAGTTGATGTCATTTCCATTTCTATGGGGTTTGATGGTGTTCCACTTTATGAGGATCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGTTGGTTTCATCCTCTGCAGGTAACAATGGTCCTGATCTTGGTACTTTGCACAATGGAATCCCCTGGCTTCTGACTGTGGCTGCAGGTACCATTGACCGCACATTTGGTTCTCTAGTTCTTGGAAATGGCCGAACCATTATTGGTTCGACCGTGTTTCCAGCAAATGCCTTGGTGGAAAATCTTCCACTTGTCTACTATAAGAATATATCAGCATGTAACTCAGTCAAGTTGTTATCGAAACTGAGAACAGATGTGATCATTGTATGTGACTTGGTTCCAGACACTACGTTAATGTACAAGCAAATGTCGGTTGTTAAAGAAGCTAGTTTGTCAGGGGCAGTGTTTTTTCTTGATGGTCCTTTGTTAAATTACTCAGGAATTGGTGGCTTTCCAAGTATTGTAATCAGTGCGAAGGATGCACCAACTGTGATCAAGTATGCAAAAAGCCATAAGAATCCAACAGCCAGTATCAAATTTCAGCAAACATTTGTTGGAATGAAGCCAGCACCAGCTCTTGCTGGTTACTCTTCAAGAGGTCCTTCACCAAACTACCCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAATGTCCTTGCTGCTTTCATTCCTGATTCTCCAGCAGCTGAAATTGGCGACAATGTGTACTTACCTAGTGACTACAATTTGCTGTCTGGAACATCCATGGCCTGTCCTCATGCTTCTGGTGTTGCTGCTCTTCTGAAAGCTGCACACCCTGAATGGAGTGCTGCTGCTATAAGGTCTGCAATAGTAACCACAGCTAGTGCTCTAGATAATACGCAAAATCCAATTAGAGACTATGGCTATCCTTCTCAATATGCTTCTCCTCTTGCCATGGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATATATGATGCCACTCCACAGGACTATGTTGATCTGCTTTGTGCTTCGAATTACACAATAAAGCAAATCTTAGCCATTACAAGATCATCATCCTACAATTGCGCAAAACCATCTTTTGATCTTAACTACCCTTCATTTATAGCCATCTATAACAACAAAACAATGTCAGTTGTCCACAAATTTAGGAGGGCAGTGACCAATGTTGGAGCTGGTGCTGCCACATACAGAGCCAAGGTGACAGAACCTAAGGGCTCTGTGGTGACAGTGTCTCCTGAGACTTTGTCATTCAGATACAAAAATGAGAAGCTGAGCTACAGTGTTGTAATAAAGTACAACAAGTACAAGAAGGAAGATATCTCTTATGGGGATCTTATTTGGATGGAAGATGGTGGAGCACACACTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGGAATTGTATGA	2304	0.4418	MREPMANFVIPLPFMLFITRWFLLAHHDSAAETSTYIVHMDRSLFPTVFSTHHDWFESSVQSIKSATPGHSFKQSQKQIVYSYNHAMYGFSAVLTSEELEALKNSRGFVAAYPDRNVTVDTTHTFEFLSLASSSGLWHASNLGEDVIVGVIDSGVWPESESFKDDGMTKKIPSKWKGTCQEGQDFNSSMCNFKLIGARYFNKGVIAAKPKARITMNSARDTEGHGTHTSSTVAGNYVSGASYFGYAKGVARGIAPRARLAMYKVLWEEGRYSSDVLAGMDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVLVSSSAGNNGPDLGTLHNGIPWLLTVAAGTIDRTFGSLVLGNGRTIIGSTVFPANALVENLPLVYYKNISACNSVKLLSKLRTDVIIVCDLVPDTTLMYKQMSVVKEASLSGAVFFLDGPLLNYSGIGGFPSIVISAKDAPTVIKYAKSHKNPTASIKFQQTFVGMKPAPALAGYSSRGPSPNYPGVLKPDIMAPGSNVLAAFIPDSPAAEIGDNVYLPSDYNLLSGTSMACPHASGVAALLKAAHPEWSAAAIRSAIVTTASALDNTQNPIRDYGYPSQYASPLAMGAGQIDPNKALDPGLIYDATPQDYVDLLCASNYTIKQILAITRSSSYNCAKPSFDLNYPSFIAIYNNKTMSVVHKFRRAVTNVGAGAATYRAKVTEPKGSVVTVSPETLSFRYKNEKLSYSVVIKYNKYKKEDISYGDLIWMEDGGAHTVRSPIVVAPSGIV	767

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium3281g00014	767	CDD	Peptidases_S8_3	117	581	IPR034197	-
	Vium3281g00014	767	Pfam	Peptidase inhibitor I9	35	118	IPR010259	-
	Vium3281g00014	767	Pfam	Subtilase family	143	594	IPR000209	GO:0006508\|GO:0008236
	Vium3281g00014	767	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	119	IPR037045	-
	Vium3281g00014	767	ProSiteProfiles	Serine proteases, subtilase domain profile.	122	616	-	-
	Vium3281g00014	767	SUPERFAMILY	Subtilisin-like	121	620	IPR036852	GO:0004252\|GO:0006508
	Vium3281g00014	767	CDD	PA_subtilisin_like	355	475	-	-
	Vium3281g00014	767	FunFam	Subtilisin-like protease SBT1.9	25	120	-	-
	Vium3281g00014	767	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	36	761	IPR045051	-
	Vium3281g00014	767	FunFam	Subtilisin-like protease SBT1.5	145	359	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium3281g00014	Vium-Chr3281	181613	184052	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium3281g00014	31	764	Subtilisin-like Serine Gene Family	AT5G67090	44.238	0.0	562

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium3281g00014	-		-	var:108328904	1344.33

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