Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3278g00003 ATGGAAACTCTTGCAGGAAAGGGAAAGTCAAATGCCATTGCCTCCGTTGTGGTTCAGAGACAACATCCCAAGAAGCAACGGGTTGGGTTCACTCAACCTTCCAATTTACCAAACATCATTCTCTCAAAAAATGAGTCTTTGCAAAGAGAATCTGCAATCTCCTGGAATAACGTCAACCTTGAAAAACCAAATTCCATAAACAACTTTCTTCTTTCCTCTCAAATTCATGAACTTGATGTTTGGGACATCAATGAGTATCTTCGTGTCTTGGAGGTGACTATAAAAAGAAGACCTGTGGTTAACTATATTCAAAAAGTTCAAAGAACAATTACCTCCAACAACAGAGCAGTACTGGTGGATTGGTTAGTAGAAGTTGCCGAGCAGTACAATCTTCTCTCCGATACTCTTCTGCTCTGTGTGTCATACATTGATAGATTTTTATCAGTCCAGCCCATGATCAGATCGAGGCTTCAATTGTTGGGTGTTTCCTGCATGTTCATTGCTTCGAAATATGAAGAAATTAATCCACCCAGTTTGAATGAGTTTTGCAACATCACTGACAACACCTATGACAAAACAGAGATTATNGTTATATTTCTGATTAAGAAAATAATATATCCATAG 624 0.3814 METLAGKGKSNAIASVVVQRQHPKKQRVGFTQPSNLPNIILSKNESLQRESAISWNNVNLEKPNSINNFLLSSQIHELDVWDINEYLRVLEVTIKRRPVVNYIQKVQRTITSNNRAVLVDWLVEVAEQYNLLSDTLLLCVSYIDRFLSVQPMIRSRLQLLGVSCMFIASKYEEINPPSLNEFCNITDNTYDKTEIXVIFLIKKIIYP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3278g00003 207 SMART cyclin_7 120 204 IPR013763 -
Vium3278g00003 207 PANTHER CYCLINS 76 195 IPR039361 -
Vium3278g00003 207 SUPERFAMILY Cyclin-like 79 195 IPR036915 -
Vium3278g00003 207 ProSitePatterns Cyclins signature. 115 146 IPR006671 -
Vium3278g00003 207 Gene3D - 82 95 - -
Vium3278g00003 207 Pfam Cyclin, N-terminal domain 85 196 IPR006671 -
Vium3278g00003 207 FunFam G2/mitotic-specific cyclin 98 202 - -
Vium3278g00003 207 Gene3D - 96 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3278g00003 Vium-Chr3278 6329 7248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3278g00003 9 195 Core Cell Cycle Gene Families AT5G43080 50.265 4.92e-49 161