Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3270g00005 ATGAGACATCTTCCTAAAGATAATACAGTTTTGATTCCAAGTTCTCTTTCTTATTTTGTACACCCTTCGAGTGCAGTGAAACTTGTTCCCATCTTTTACCCGTTTACTTTTGTTGTGGTGGTGCAGTCATCTCGGAACACCTACATAGGAGATGAAGGGACAAGAGGAGTGTCCGGCGGAGAGAGGCGGCGCGTCTCAATCGGCGTGGACATCATCCACGGCCCATCACTTCTCTTTCTGGACGAGCCAACCTCAGGGCTAGACTCTACCAGCGCCCACAGCGTGATCGAGAAAGTGCACGACATCGCACGCAGCGGCAGCACCGTCATCCTCACCATCCACCAGCCCTCGTCCAGAATCCAACTCCTCCTCGACCACCTCATCATCCTCGCACGGGGCCAGCTCATGTTCCAAGGGTCGCCGCAAGACGTGGCCCTCCACTTGTCACGCATGCCACGCAAAGTCCCCAAGGGAGAGAACCCCATTGAAAGTCTGATTGACGTGATCCAAGAGTACGATCAGAGTGAGGTTGGAGTTGAAGCACTTGCAGAGTTTGCACGCACTGGGGTGAAACCACCTCCTTTGTCCAACCAGCCCCACTCAGTGTCCACTATTGCACCCTCTTATGCCAATATCTCTCACCTTAGCCACAGGTTTGACGAGAAGTCTGTGGAGTTTTCTCACTCCTCGCAGGTGAGTAGAAGGGCAGTGGACGGTTTTGATCACAGTCTCAGAAGTCCCTATAACAACACTTCCATGTCGTGGAGCACTGGGAATAGTGCAGCATTTCTCAAGTTCACACCAGCACGGCTTAAGAATGATCACAAGCCCCACAATACCACAAGAAACAATGCTTCACCTGGCTACTACACATACTCGAGTGAAATCTTTCAAGCCACTCCAACACCCCACAGCAGTGACTACACAGTGAATGAGAATGACTACCTCACTCCCTCAAATGGCACACAAGAACACCTTGGCCCAAAGTTTGAAAATTCTTACATAACAGAGATATGGATACTCATTCGCCGCAACTTCATAAACATAAGGCGCACCCCTGAGCTATTCCTCTCAAGACTGATGGTTCTCACCTTCATGGGCTTCATGATGGCCACCATGTTCCACAACCCTAAAAAAGATTTGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACAGTGTGCCTCTTCTTCTTCTCTTCCAACGATGCTGTCCCAGCCTTCATCCAAGAAAGGTTCATCTTCATAAGGGAAACTTCTCATAATGCCTATAGAGCTTCCACTTACACCATTGCAGGCATCATCACTCACATGCCATTTATTCTTCTTCAAGCAGCTGCCTATGCAGGCATTGTTTGGTTTGCCCTAAAACTCCGAGGCCCTTTTCTTTACTTCTTGCTTGTTCTATTCGTTTCTCTTCTGTCAACCAATTCATTCGTTGTATTTGTGAGCTCAGTGGTGCCAAACTACATATTGGGTTATGCTATGGTTATTGCCTTCACTGCCTTGTTCTTCTTGTTCTGTGGATACTTCTTGAGCAGCCATGACATTCCCCGTTACTGGCGTTGGATGAACACAATTTCAACGATGACATACCCTTATGAGGGGCTCTTGATGAACCAGTACCAGGTCAACGATACGTTTGGATATGTGGATGGAGTACCCATTACCGGTTTTCAGATCTTGGAGAGTCTACATATCAAGACTGATGGAAGTAGGAAGAGGACAGTGGTGCTTATAATGTTTGGTTGGGCTGTGCTATACAGGATTTTATTTTACCTAGTCCTTCGTTTTGCATCGAAAAACCAGAGGTCGTAG 1821 0.4783 MRHLPKDNTVLIPSSLSYFVHPSSAVKLVPIFYPFTFVVVVQSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPQDVALHLSRMPRKVPKGENPIESLIDVIQEYDQSEVGVEALAEFARTGVKPPPLSNQPHSVSTIAPSYANISHLSHRFDEKSVEFSHSSQVSRRAVDGFDHSLRSPYNNTSMSWSTGNSAAFLKFTPARLKNDHKPHNTTRNNASPGYYTYSSEIFQATPTPHSSDYTVNENDYLTPSNGTQEHLGPKFENSYITEIWILIRRNFINIRRTPELFLSRLMVLTFMGFMMATMFHNPKKDLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTIAGIITHMPFILLQAAAYAGIVWFALKLRGPFLYFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAMVIAFTALFFLFCGYFLSSHDIPRYWRWMNTISTMTYPYEGLLMNQYQVNDTFGYVDGVPITGFQILESLHIKTDGSRKRTVVLIMFGWAVLYRILFYLVLRFASKNQRS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3270g00005 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 154 IPR027417 -
Vium3270g00005 606 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 593 - -
Vium3270g00005 606 Gene3D - 40 188 IPR027417 -
Vium3270g00005 606 Pfam ABC-2 type transporter 337 543 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3270g00005 Vium-Chr3270 26609 29143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3270g00005 36 171 Calmodulin-binding Proteins AT2G36910 27.206 2.48e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3270g00005 K05681 - gmx:100804809 932.169