Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3246g00003 ATGGTGGTCGTCGTCGGCGGCGGCGGCGGTGGTTTCAAAACCATCCCTGTGCCGCCTAAATCTATTGTCTTCTTGAACCAATGGTGGCTTGTGAAGCAACGCAACGGTTTAGCCGTTGGAGGGGTTGCTTCCGTCGGGAGAGACAGAGAAAGAGTGTTTACGTCCACCGTCATTGCGGAGAGAGAAGAAGCCAATGTCGTACGTACTCAAGATGACACCACTATTATTTTCCGTGGTTTCGTCGACACCTCTCGTTCATCTCAGAGTGGCGTCCCCTTAGAGGTTTGTCAACACTTCCTGGTTGGATTTCCATACAATTGGAGCGCGTATTCTTCAATTGATAACATAGAATGCGAATGTAACAATAGTGAAAAAGGAATCCCAGTTGAAAGCCTAGCCAATGTTGAAAGCCTAGCCAATATTCAAAGCCAAGCCAATGTTGAAACCCAAGCCGATGGTAAATCTTCGATCGGTATGTATGATTCCACAGGCCCTTCTGGAAAAAACATCGTTAAAACTCAAATTTCGGCCAAGAAAAAGAAAGCTGTTAGAGAAAAGATAGGGTTGGATGCAAGTAGGATGGTAACGAGAAGCATTTCCAGAAATAGTCAATCAATGCCCAAAGAAGACGGGAAAGCTCCAAAAGCCAATGTTTTTTCTCAAGTTAGGAGATCTCCCAGGCTATATAGTTGTAAATAA 699 0.4492 MVVVVGGGGGGFKTIPVPPKSIVFLNQWWLVKQRNGLAVGGVASVGRDRERVFTSTVIAEREEANVVRTQDDTTIIFRGFVDTSRSSQSGVPLEVCQHFLVGFPYNWSAYSSIDNIECECNNSEKGIPVESLANVESLANIQSQANVETQADGKSSIGMYDSTGPSGKNIVKTQISAKKKKAVREKIGLDASRMVTRSISRNSQSMPKEDGKAPKANVFSQVRRSPRLYSCK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3246g00003 232 MobiDBLite consensus disorder prediction 197 217 - -
Vium3246g00003 232 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 23 188 - -
Vium3246g00003 232 Pfam SANTA (SANT Associated) 23 110 IPR015216 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vium3246g00003 SANTA 3.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3246g00003 - - vra:106755867 360.147