Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3237g00102 ATGAAAGCTTCAAAGCAGCAGCAGCAGAAGCAGAATCAGCTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGCTGCAGGTTCAGTGTTTCTTCTTCTGAAGAAGCAGAAAGCTCAGCCTCTGATAGGTTCCCTTCTGTTTCAAGCCTTGCACACGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGATGGAAGCTAGTCATGTAGAGAGAAGAAGACAGCAGAGCAGTGAAGGGACAAAGTTTGTCGTGATGGTAGCAATGGAGAAGAGCTCTTACGATCCAAGAGTAGATTTTAGAGAGTCCATGATGGAGATGATAGCTGCCAACCGCCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTAATCAGTACCGTAGTCTTATTCTTGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAAATGCCATTGA 477 0.4319 MKASKQQQQKQNQLQQRGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERMEASHVERRRQQSSEGTKFVVMVAMEKSSYDPRVDFRESMMEMIAANRLQDAKDLRSLLNYYISMNSNQYRSLILEVFHEVCTNLFLSCKCH 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3237g00102 158 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 152 IPR038933 GO:0045892
Vium3237g00102 158 Pfam Transcriptional repressor, ovate 95 152 IPR006458 -
Vium3237g00102 158 NCBIfam uncharacterized plant-specific domain TIGR01568 89 152 IPR006458 -
Vium3237g00102 158 ProSiteProfiles OVATE domain profile. 91 150 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3237g00102 Vium-Chr3237 659031 659849 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium3237g00102 Ovate 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3237g00102 - - var:108330150 291.582