Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3237g00056 ATGGCTCTCAAGTCTCTGATTCTTTTGGCTGTGTTATCCTTTTCAGCACTGTCCCTGAGTCCTTCTCTTGCACAAGATAATGGCCTTGTCATGAACTTCTACAAGGAAACTTGTCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGCTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGGACCTTGTCTGAGAAGGAGACAGACAGAAGCTTTGGTTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTGGAAAGGGAGTGTCCGGGAGTTGTTTCCTGTGCTGATATACTCGTTCTCTCTGCCAGAGATGGCATTGTTTCGCTAGGAGGCCCCCATATCCCTCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGAAGTGGTTGAACAGTTCCTCCCAGACCACAATGAGTCCATTTCTTCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACTCCCGGGGTGGTTGCTTTGCTTGGAGCACACAGTGTTGGTAGAACACATTGTGTGAAGTTGGTGCACCGTTTGTACCCGGAGATTGATTCGGCACTGAACCCCGACCATGTCCCTCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGATCCGAAGGCCGTGCAGTATGTGAGAAACGACCGTGGCACCCCCATGATTCTAGACAACAACTACTACAGAAACATATTGGACAACAAGGGGTTGCTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAAGACTATTTCTTCAAGGAGTTTTCTAGAGCCATCACCTTGCTCTCTGAAAACAATCCTCTCACTGGCACAAAGGGAGAGATCAGAAAGCAGTGCAATCTTGCCAACAAGCACCGTGAGGAGCCTTGA 996 0.4779 MALKSLILLAVLSFSALSLSPSLAQDNGLVMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRAEVVEQFLPDHNESISSVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDSALNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNLANKHREEP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3237g00056 331 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Vium3237g00056 331 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 FunFam Peroxidase 165 304 - -
Vium3237g00056 331 Gene3D - 32 325 - -
Vium3237g00056 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 Gene3D Peroxidase, domain 2 165 304 - -
Vium3237g00056 331 PANTHER - 9 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3237g00056 331 FunFam Peroxidase 32 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3237g00056 Vium-Chr3237 370605 372589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3237g00056 1 327 Peroxidase AT4G21960 78.723 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3237g00056 K00430 - gmx:547513 617.846