Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3237g00034 ATGCTCCTCACGGACCTCCTTCTCTTCGCCTTCGGCCTCCTCTTCCTCCGTTGGTGGTGGCGCCGCTGGTCCACCACCGGGGGAGGCCCCAAGAACCTCCCCCCAGGGCCTCCCGGTTGGCCCATCGTCGGTAACCTCTTCCAAGTCGTCCTGCAGCGCCGTCACTTCATCTACGTAGTCCGCGACTTACGTAAGAAGTACGGCCCAATCTTCACCATGCAGATGGGCCAGCGCACGTTGATCATCGTCTCCAGCGCGGACCTCATCCACGAGGCTCTCATCCAGCGCGGCCCCCAGTTCGCCAGCCGGCCCCAAGACTCCCCCATCCGTCTCATCTTCAGCATGGGGAAGTGCGCCATCAACTCCGCCGAGTACGGCCCTCTCTGGCGCACCCTCAGGAAGAACTTCGTCACCGAGATGATCACCCCGCTGAGGATCAAGCAGTGCAGTTGGATAAGAAAATGGGCCATGGAGGCCCACATGAGTAGGATCCAACGGGAGGCCCGTGAGCAAGGTTTCGTTGAAGTCATGAGCAACTGCAGACTCACCATCTGCAGCATCCTCATCTGCCTCTGCTTCGGCGCCAAGATAGAGGAGAGCCGAATCAAGAGTATAGAAAGCATCTTGAAGGACGTCATGCTCATCACGCTCCCCAAGCTTCCAGACTTTTTGCCCGTGTTCACGCCGTTGTTCCGGCGCCAGGTGAAGGAGGCCAGGGAGTTGAGGAAAAGACAGGTCGAACTGTTGGCGCCGTTGATAAGGAATAGAAAGGCCTACGTGGAAGGGAGATTCTCCGGAGATGAAATGGCCAGTCCCGTTGGGGCTGCTTACTTGGACTCGTTGTTCGGGTTGGAGGTGCCTGGACGTGGACAGTTGGTGGAGGAAGAGCTCGTGACGCTCGTGTCGGAGGTTATCAGCGCCGGCACGGACACGAGCGCCACCGCGGTGGAGTGGGCGTTGTTTCATTTGGTGGTGGATCAAGAGATTCAGGAGAGGTTGTACAAAGAGATTGTGGACTGTGTGGGGAAGGACGGGGTGATTACGGAGAGTCACGTTGAGAGGATGCCTTACCTGAGCGCCGTGGTGAAGGAGACCTTCCGGCGTCACCCGCCGAGCCACTTCGTGCTGTCCCACGCTGCGACGGAGGATACTAAGCTGGGAGGGTATACGGTCCCGAAGAACGCGAGTGTGGAGTTTTACACGGCCTGGTTGACGGAGGATCCGAATATGTGGGAGGATCCGAATGAGTTCCGACCCGAAAGGTTTTTGAGCGGGGATGGGGTTGACGTGGACGTGACCGGAACGAAAGGTGTGAGGATGATGCCCTTCGGTATAGGGAGGAGGATTTGTCCGGCGTGGAGTTTAGGCATGTTGCATATAAACTTGTTATTGGCTAAGATGGTGCAGGCTTTCCACTGGTTGCCCAATCCCAACGCCCCACCCGACCCGGCTGAGATATTCGCTTTCACTGTTGTCATGAAGAACCCTCTCAAGGCTGTTATTGTTCCACGATCCATTTAA 1521 0.574 MLLTDLLLFAFGLLFLRWWWRRWSTTGGGPKNLPPGPPGWPIVGNLFQVVLQRRHFIYVVRDLRKKYGPIFTMQMGQRTLIIVSSADLIHEALIQRGPQFASRPQDSPIRLIFSMGKCAINSAEYGPLWRTLRKNFVTEMITPLRIKQCSWIRKWAMEAHMSRIQREAREQGFVEVMSNCRLTICSILICLCFGAKIEESRIKSIESILKDVMLITLPKLPDFLPVFTPLFRRQVKEARELRKRQVELLAPLIRNRKAYVEGRFSGDEMASPVGAAYLDSLFGLEVPGRGQLVEEELVTLVSEVISAGTDTSATAVEWALFHLVVDQEIQERLYKEIVDCVGKDGVITESHVERMPYLSAVVKETFRRHPPSHFVLSHAATEDTKLGGYTVPKNASVEFYTAWLTEDPNMWEDPNEFRPERFLSGDGVDVDVTGTKGVRMMPFGIGRRICPAWSLGMLHINLLLAKMVQAFHWLPNPNAPPDPAEIFAFTVVMKNPLKAVIVPRSI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3237g00034 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vium3237g00034 506 FunFam Cytochrome P450 family protein 28 506 - -
Vium3237g00034 506 Gene3D Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 476 - -
Vium3237g00034 506 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 SUPERFAMILY Cytochrome P450 34 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 CDD CYP77_89 66 498 - -
Vium3237g00034 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3237g00034 506 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3237g00034 Vium-Chr3237 231855 233510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3237g00034 1 505 Cytochrome P450 AT1G11600 68.235 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3237g00034 K21995 - gmx:100783249 870.922