Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3229g00012 ATGCTGCGAACTCGTTCATATCATTACAAAATTTTGGCAGAACTGGGTGTTGGAGACCCATCAAGAAAAATTGTGGAAATGATCTTTCAAAAAGCTTGGCTCAACACATCAAAGCCACTGAAAAAGGTTAGAACAGTCCTCAGGGTGAGCTACTCAGAAGAAGTCCTTGAAAGGTTTGAAAAATATAGAGAAAATGTGAAGAAGGTGGCCTCTGAGCAATATCCAAGGCATCCAAGGAGCACAGTTGATGGGAATGAGCTGTTGCGGTTCTATGGTACTACAGTGAGATGTTTACATGGGAAATCTACGAAGAGAGTTCATGATCTTTGTAAAGATCCATCTTGTTATCTATGCCAAATAATTCAGTTTAATTTCAAGATACAATACGCTCACTTGAATGCGAGTGACAAAGAGTTAAGTAACAGAGCAACTGCCACTGCCAGGGTACATAGCGTGAAAAAAGCTGCAATAATTTGCAGGATAATTGCTGGAATTCCAGAAAATGAAGTTGATGGTGAATATGAAGGACCTGGCTCAACTGGGTTAGGAGAAATGCAGTTTAGCTTAGAAAAATTTGTAGTAAAAAATCCCAGTTCTATTCTTCCTTGTTTTGTAATAATTTTCAGCTAA 630 0.3857 MLRTRSYHYKILAELGVGDPSRKIVEMIFQKAWLNTSKPLKKVRTVLRVSYSEEVLERFEKYRENVKKVASEQYPRHPRSTVDGNELLRFYGTTVRCLHGKSTKRVHDLCKDPSCYLCQIIQFNFKIQYAHLNASDKELSNRATATARVHSVKKAAIICRIIAGIPENEVDGEYEGPGSTGLGEMQFSLEKFVVKNPSSILPCFVIIFS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3229g00012 209 Gene3D - 11 209 - -
Vium3229g00012 209 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 10 208 - -
Vium3229g00012 209 SUPERFAMILY ADP-ribosylation 13 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3229g00012 Vium-Chr3229 62810 63444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3229g00012 12 207 C2H2 Transcription Factor Family AT5G54630 36.574 2.40e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3229g00012 - - vum:124833584 423.32