Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3217g00006 ATGTTGGCTACTAGTGCTGTTACTTCTTTGCCCGTGTTACCACCAGTGAGAAGAGGTGGCCACCACAACGAGCAGAATGTTGGTACCTCATTGAGTTTACCAAGACTATCATGGACAACTAATAATTCAAAATCTCCTAGTTGTGCACAGTTTCCATTTGGTACAAGAGCTCGCTCTCCTCAAACAGCAACTATAATATGTTCTGCAGCTTTGAATGCAAGATGTGGTGCAGAGCAAACCCAAACTGTTACTCGAGAGGCTCCTACAATTACTCACATTCCTGGAAAGGAGAAGTCACCACAGCTTGACGACGGAGGAACTGGATTTCCACCTCGTGATGATGATGATGGTGGTGGTGGAGGCGGCGGAGGTGGAGGCAACTGGTCTGGCGGATTCTTCTTTTTTGGGTTTCTTGCTTTTCTTGGTTTCTTAAAGGATAAGGAAACCGAAGACACATACGGGGATGACCGAAGAAGGTGA 480 0.4646 MLATSAVTSLPVLPPVRRGGHHNEQNVGTSLSLPRLSWTTNNSKSPSCAQFPFGTRARSPQTATIICSAALNARCGAEQTQTVTREAPTITHIPGKEKSPQLDDGGTGFPPRDDDDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKETEDTYGDDRRR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3217g00006 159 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 3 159 IPR040299 -
Vium3217g00006 159 MobiDBLite consensus disorder prediction 1 35 - -
Vium3217g00006 159 MobiDBLite consensus disorder prediction 79 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3217g00006 53 159 C2H2 Transcription Factor Family AT1G56200 67.890 2.39e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3217g00006 - - gmx:100306022 189.119