Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3209g00002 ATGCTAACCCTCAATATCAATGCTATTTCTTCTTCGTTCTCAATTGTTCCATTTCATGCCAATTTTCCACTGTCTACTCAAACACAATTATTATTTCCTTCCAATCTTAGTTACTCCTTTGCTACTACAGCAACCAGAAAGTTCAAGTCTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCTGGGTTGATGAAAGATAACTCGATGCAAGTCATTGATCCACCCTCTATAGATGAAGAAGATGAAGAACCTCTGCCTCAAGTGTTTGTCCTTGTGGAAAAGACAGAACCTGATGGGACAATTGAACAAATAATATTCTCTTCAGGTGGAGATATTGATGTATATGATCTTGAAGCCCTCTGTGACAAGGTAGGGTGGCCACGTAGACCACTGTCAAAATTAGCTGCGGCTTTGAAAAATAGCTATATAGTAGCCTCACTTCATTCTATAAGAAAGTCGCCTGGGTCAGAGGGGGATGAACAGAAGAGATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTTCTAGTTGATCCTAGTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTATAGAGAAACTGATTAGAGCTCTTCTGCAAAGGGACATTGGCAATATAACTCTGTTTGCAGATAGTAAAGTCGTGGAATTTTATCGCAATTTAGGCTTTGAAGCAGACCCAGAGGGCATAAAAGGCATGTTTTGGTATCCGAATCACTAA 750 0.408 MLTLNINAISSSFSIVPFHANFPLSTQTQLLFPSNLSYSFATTATRKFKSFQLKAGFWESIKSGLMKDNSMQVIDPPSIDEEDEEPLPQVFVLVEKTEPDGTIEQIIFSSGGDIDVYDLEALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGDEQKRLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALIEKLIRALLQRDIGNITLFADSKVVEFYRNLGFEADPEGIKGMFWYPNH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3209g00002 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 115 238 IPR016181 -
Vium3209g00002 249 Pfam Acetyltransferase (GNAT) family 116 233 IPR000182 GO:0016747
Vium3209g00002 249 CDD NAT_SF 161 218 - -
Vium3209g00002 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 112 249 IPR000182 GO:0016747
Vium3209g00002 249 FunFam Putative acetyltransferase NSI 110 246 - -
Vium3209g00002 249 PANTHER ACYL-COA N-ACYLTRANSFERASE 27 246 IPR045039 GO:0008080
Vium3209g00002 249 Gene3D - 110 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3209g00002 Vium-Chr3209 27807 34291 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3209g00002 Acetyltransf_1 1.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3209g00002 K22450 - gmx:100799333 452.21