Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3205g00003 ATGTGTTCCAACGAGAGAAAAAGGTTTATGGGAGCTCTATTCAAAACAAATGGAGGTTGTGGATGTAGCAACCCTAAATCCTATGAAGTACTCCAACCCTCCCCAAAACTCAACACCTCAATTCGAGAAAACACAAACCCTACCACTTCCGGCGACAAAGACAACAAACTCTTCTTCGAAGTTCGCACAAACCATGAAAACCCTAACAACGACAACATTCGAAAACCAAATTCAAAACTCATTGACAGTGTGGCGGTTGAGAAGGATTCGAAGGACCCGCACAAGGATTTTCGAGAGTCCATGCTCCAAATGATCTTCCAGAGACAAATCTTCACCAAAACCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCGCTTGAACGCCGCCTGTCACCACCAAGTTATCGTTCAAGCTTTCATGGAGATTTGTCTCGAAACGTTCCCCAATAAGAATATCAACGCCGCAGACGCCAATGCTGCTTCTTTCAATAACAAAATTTGA 501 0.4411 MCSNERKRFMGALFKTNGGCGCSNPKSYEVLQPSPKLNTSIRENTNPTTSGDKDNKLFFEVRTNHENPNNDNIRKPNSKLIDSVAVEKDSKDPHKDFRESMLQMIFQRQIFTKTDLQDLLECFLRLNAACHHQVIVQAFMEICLETFPNKNINAADANAASFNNKI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3205g00003 166 Pfam Transcriptional repressor, ovate 90 145 IPR006458 -
Vium3205g00003 166 NCBIfam uncharacterized plant-specific domain TIGR01568 84 145 IPR006458 -
Vium3205g00003 166 MobiDBLite consensus disorder prediction 32 53 - -
Vium3205g00003 166 ProSiteProfiles OVATE domain profile. 86 145 IPR006458 -
Vium3205g00003 166 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 146 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3205g00003 Vium-Chr3205 68185 68685 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium3205g00003 Ovate 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3205g00003 - - vun:114184742 268.47