Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3169g00006 ATGGACATTTCAGAGCTGGCCAAGAAGCTCGATCTCTCCGATTCCAAACTCGTCGTCAGAAAAGCCGCCGAGATCCGTCGCCTCTGCGATGTCCAGTTCGATTCCTCCGTCATCGGAGTCGGCGAGGTTGCTAAATCTCTTATTTGCTTGGAAATCGCGGCAACAAGGCTCGGCGTTCTCTTCGACCGATCCTCTGCGGTGAGGCTTAGCGGAATGTCCGAAAAAGCTTACATCAGATGCTACAACTCTCTCCACAACGGTCTTGGCGTGAAGACGAAGATAGATGTGAGGGAGTTGGCGATTCAGTTTGGTTGCGTTCGTATTATTCCTTTCGTTCGCGACGGTCTCAAACTGTATAAGGATCGTTTTGTTTCGTCTTTGCCGACTTCTCGTCGTGCAAGTGCTGATTTCACGCGTCCGGTGTTCACCGCTGTTGCTTTTTATCTATGTGCTAAAAAACACAAGCTCAAAGTGGACAAGCTGAAGTTAATTGAGCTTTGTGGTACATCTGAATCCGAGTTTTCTAGTGTTTCTGTTACTATGAAGGATTTGTGTCATGACGTGTTTGGGGTTGCAAAGGAAAAAAAGGATGCTAGGGAGGTGCAATCAAATCGAGATTTGCTTGACGTGTTGCCAAGTAAAAGGAAAGCCGATGATGGAGGTTATTTGTCCGATGATGGTCCTGAGCTTTCATGTTATAAAAAACGCAAGCAAATGGAAACACGTGATTATGAAAAGTGGAAATCTTCAGTGGTTGCATCCAATCAACAAAACAAGACAGAAGCTCCTTGCAAACGAACCAAACAAACTCGTCTCAACTTTATCAAGAAATCTTCTGATACTCAGGAATTAGAGGCCATGTGA 864 0.4537 MDISELAKKLDLSDSKLVVRKAAEIRRLCDVQFDSSVIGVGEVAKSLICLEIAATRLGVLFDRSSAVRLSGMSEKAYIRCYNSLHNGLGVKTKIDVRELAIQFGCVRIIPFVRDGLKLYKDRFVSSLPTSRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSVTMKDLCHDVFGVAKEKKDAREVQSNRDLLDVLPSKRKADDGGYLSDDGPELSCYKKRKQMETRDYEKWKSSVVASNQQNKTEAPCKRTKQTRLNFIKKSSDTQELEAM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3169g00006 287 MobiDBLite consensus disorder prediction 248 263 - -
Vium3169g00006 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 92 IPR008721 GO:0003677|GO:0005664|GO:0006260
Vium3169g00006 287 FunFam Origin recognition complex subunit 6 92 188 - -
Vium3169g00006 287 CDD Orc6_mid 93 188 - -
Vium3169g00006 287 Gene3D - 91 188 - -
Vium3169g00006 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 277 IPR020529 GO:0005664|GO:0006260
Vium3169g00006 287 MobiDBLite consensus disorder prediction 246 287 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3169g00006 1 285 Core DNA Replication Machinery Family AT1G26840 65.614 1.11e-133 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3169g00006 K02608 - gmx:100777539 478.404