Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3162g00002 ATGTCCGAAAACGGAGAAGAGAAGTTACTTGCTGTGGCGCGGCACATAGCGAAGACGCTGGGCCACAACAACACCATGTCTGATGACATTTTCCAAATATTGTCCAACTTCGATGGAAGGTTCTCGAGAGAGAATCTTTCGGAAAAGGGCGCAGATGCGGATTCTAGAGCCTGCGCCGCACTCGATCATTCCCTCAAATCCCTAGACCACCGGATCTCTCACCACGTCTCCTCCGACCGTCCAATCTGGGCCAACGCCGCCCACGCCGCTGCCTTCCTTGACGCCGTGGACGAGCTCGTCGCTGTCGTTGCCGAGTGGAACCACCTCGCCTCCGACAAGGCCGTCGCCGCGTGCCTCGTACGGGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTGGAGGAGGAGTTCCGCACGCTCATGGAGCGCGGCGGTGAGTCGTTTGGCCTCACTAGGAGCTACCGCAACGGTGAATCGACTGAAAACATGCCGTTCGAGTCGGAGGAAGAGGACGAGGAGGAAGACGAAGTGAGAAACGGGGGAGATGAGGAGCAGATTCCGGTGGCGCTGCCGGTCACGGACTTCGACATCGTCATCGACGCGCTGCCAGCGGGGACGATCAACGACCTCCACGAGATCGCGAAGCGAATGGTGGCCGGGGGGTTCGGTAAGGAGTGCTCGCACGTGTACAGCAGTTGCCGGAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTACAGAAGCTCAGCATCGAGGACGTCCACAAGATGACGTGGCAGGAACTTGAAGATGAAATTGAGAAATGGATTAAAGCCTCCAACGTCGCTCTCAAGATCCTCTTCCCAAGCGAGCGGCGTCTCTGTGACCGCGTCTTCTTCGGATTCGCCTCCGCCGCGGATTTTTCATTCATGGAGGTTTGTCGCGGATCCGCGATTCAGTTGCTGAATTTCGCTGACGCCGTCGCGATAGGGAGCCGGTCTCCGGAACGGCTGTTCAGAATCCTTGACGTGTTCGAGACGCTTCGTGACCTAATTCCCGAATTTGAAGCCCTGTTTTCTGATCAATTCAGCGTCTCGCTCAGGAACGAAGTGATTACGATTTGGAAAAGGCTGGGGGAATCAATTAGGGGCATTTTTATGGAGCTGGAGAATTTAATTCGCCGAGATCCGGCGAAGACGGCGGTTCCCGGTGGCGGTCTGCACCCGATAACTCGCTACGTGATGAACTACCTCCGTGCGGCGTGCCGGTCGCGGCAGAGCTTGGAGCAGGTTTTTGAGGACTACGGGTTGAAAGAGTACCCGAAGCTTGATGACAGAGTCCACTCTTCATCTTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTGTTAGAGAGCAATCTGGAAGCGAAGTCGAAGATTTACAAGGACCCTGCTTTGAGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGGCCAAAGATAGTGAACTAGGAACCCTCTTGGGAGATGATTGGATCAGAAAACATGCTGCAAAAGTTCGACAATTCCATGTGCACTATCAAAGAAGCTCGTGGAGTAGGGTATTGGGAAGTCTGAAGCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAAGTCAATGAAGGAGAAGCTCAAGTGGTTTAACACAGTGTTTGATGATATTTGCAAGGAACAATCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCTCTTGAGAAAATCTTGTTGCCTGCTTATGGAAACTTTGTAGCGAGGTTTGAGAATGTTCCAGAAATCGGTAAGCATGCTGATAAGTATATCAAGTATGGAACAGAGGATATCCAAGCCAAACTCAACGAATTGTTTCAGGGATCAAGTGGTAACCGAAAGTGA 1908 0.5215 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGADADSRACAALDHSLKSLDHRISHHVSSDRPIWANAAHAAAFLDAVDELVAVVAEWNHLASDKAVAACLVRAEDMLQHAMFRLEEEFRTLMERGGESFGLTRSYRNGESTENMPFESEEEDEEEDEVRNGGDEEQIPVALPVTDFDIVIDALPAGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEDVHKMTWQELEDEIEKWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQFSVSLRNEVITIWKRLGESIRGIFMELENLIRRDPAKTAVPGGGLHPITRYVMNYLRAACRSRQSLEQVFEDYGLKEYPKLDDRVHSSSSLSVQMDWIMELLESNLEAKSKIYKDPALSYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHAAKVRQFHVHYQRSSWSRVLGSLKLDSTVSLPPNALAKSMKEKLKWFNTVFDDICKEQSSWFVFDEQLREEIRISLEKILLPAYGNFVARFENVPEIGKHADKYIKYGTEDIQAKLNELFQGSSGNRK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3162g00002 635 MobiDBLite consensus disorder prediction 163 180 - -
Vium3162g00002 635 FunFam Exocyst subunit Exo70 family protein 75 635 - -
Vium3162g00002 635 SUPERFAMILY Cullin repeat-like 83 627 IPR016159 -
Vium3162g00002 635 MobiDBLite consensus disorder prediction 151 184 - -
Vium3162g00002 635 Gene3D Exocyst complex component Exo70 81 635 - -
Vium3162g00002 635 Pfam Exo70 exocyst complex subunit 269 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium3162g00002 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 629 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3162g00002 Vium-Chr3162 10606 12863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3162g00002 1 635 EXO70 exocyst subunit family AT5G58430 69.921 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3162g00002 K07195 - gmx:100803694 1093.57