Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium312g00004 ATGACATCCGACGGAGCTACTTCGGCTGCGGCGGCGGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGTAGGAGAGAACGAAGGCGACGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACATATCGCAAGGGTTCCAAACCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCTCTTTTCTTCTTCACAGAATCCAAGTCCGTTTTCTTCGTCGCATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCCTCTCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTGTCATCACCTACGTCAAGAAATCCAAAACCAATTCCTACATGGGAGTCCATTGCCAAAGAATCTATGACCTCCTTCAACTACCCTCTCTTTGCAGCTTCTGCTCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCTGCCACTATTCCAGAGTGTGACGAGTCTGATACTTCCACCTGTGAATCTAACCAGTGGGTGAAATTTCAAGCATTTGCTCCTTCTGCATCTGTGTTTCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCTCCCGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTACAGGTAATGCCTTGGGTTGGTGAAAGAATTCATGAAGTGGCATTGGATGATTTGGAACTCACTCTTGGAAGCGGGAAGGTGCGGAGTTAG 951 0.5005 MTSDGATSAAAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGSKPPLANGAGSSMRNILFSSSQNPSPFSSSHPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMTSFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESNQWVKFQAFAPSASVFPTSPTFNLVKPVVPPGVPDNSIQEMRTSSEEIGVQVMPWVGERIHEVALDDLELTLGSGKVRS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium312g00004 316 MobiDBLite consensus disorder prediction 98 127 - -
Vium312g00004 316 MobiDBLite consensus disorder prediction 1 34 - -
Vium312g00004 316 MobiDBLite consensus disorder prediction 80 127 - -
Vium312g00004 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 315 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vium312g00004 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 17 156 IPR008540 -
Vium312g00004 316 MobiDBLite consensus disorder prediction 19 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium312g00004 Vium-Chr312 21321 24745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium312g00004 1 316 BZR Transcription Factor Family AT1G19350 67.656 8.75e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vium312g00004 BES1_N 1.6e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium312g00004 K14503 - gmx:100807071 504.597