Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3124g00023 ATGCCGACCGTGGCGGTGAAACTCTACAGCGTCTTCTTTAAGTTTCTCCTAAAGAACCGTTTGCAGAACCAGATCCATGCCCCGTCCGAAGAATCCAACCAGTTCGGTGTTACGACCCGACCCGACGAGTCCGTCGCCGCCGCCAACCCCTCCTTCTCCGACGGCATCGCCACCAAAGATATCCACATCGATCCCGTGACCTCCCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCACTCTCTCCCGAACCCAAATCCAAAACTATCTACAAATCCGAACCTGGATCCGCGGGGAACCTTGAAACGGCGTCGTCGCGCGCGGTGCGGCGAAATAGCTACGAGCCCTCAGTGTTTACGCCGCGGGAGGAGACGAGGCGGAGCAGCGCCGGGGAGTACCGGGGGTACTTGCCGGCGGCGGACGGTCGCCGGAAAAAGTTACCGGTGGTGTTACAGTTCCACGGCGGGGGGTGGGTGAGCGGGAGCAATGATTCGGTAGCGAACGATATGTTCTGCCGGAGGATTGCGAAGCTCTGCGACGCGGTGGTGGTGGCGGTCGGCTACCGGCTGGCGCCGGAGAATCGGTTCCCGGCGGCGTTTGAGGACGGGGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCGGAGTGTAGTAAGTCGTTGGGAGGGAGGAAATTTGAGGGTCATCACAAGCATATTGTTGATTCTTTTGGAGCGTCAGTAGTTGAACCTTGGTTGGCTGCTCATGCAAATCCATCTAGATGTGTTCTTCTTGGTGTGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAAAGCTGTAGAAGCAGGTTCACTTCTGGACCCGGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTAGCATGGAAACTATTTCTACCAGAGGGGGAGTTTAGCCTAGACCATCCAGCTGCCAATCCCCTTGTCCCAGGCCAGGGACCTCCTTTAAAGCAGAGACCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGGGACCGTGCCATTGCATATTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTTATGAGTATAAAGATGCAGTCCATGAATTTGCAACACTTGACATCCTTATCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCCCTTCGAGGTCACGAATTCTCATATTGA 1302 0.5361 MPTVAVKLYSVFFKFLLKNRLQNQIHAPSEESNQFGVTTRPDESVAAANPSFSDGIATKDIHIDPVTSLSVRIFLPDSALSPEPKSKTIYKSEPGSAGNLETASSRAVRRNSYEPSVFTPREETRRSSAGEYRGYLPAADGRRKKLPVVLQFHGGGWVSGSNDSVANDMFCRRIAKLCDAVVVAVGYRLAPENRFPAAFEDGVKVLNWLAKQANLAECSKSLGGRKFEGHHKHIVDSFGASVVEPWLAAHANPSRCVLLGVSCGANIADYVARKAVEAGSLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPAANPLVPGQGPPLKQRPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILIKSPQAQVCAEDIAIWVKKYISLRGHEFSY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3124g00023 433 MobiDBLite consensus disorder prediction 31 46 - -
Vium3124g00023 433 Gene3D alpha/beta hydrolase 20 427 IPR029058 -
Vium3124g00023 433 MobiDBLite consensus disorder prediction 31 51 - -
Vium3124g00023 433 PANTHER ARYLACETAMIDE DEACETYLASE 53 398 - -
Vium3124g00023 433 MobiDBLite consensus disorder prediction 82 130 - -
Vium3124g00023 433 MobiDBLite consensus disorder prediction 92 112 - -
Vium3124g00023 433 Pfam alpha/beta hydrolase fold 149 398 IPR013094 GO:0016787
Vium3124g00023 433 SUPERFAMILY alpha/beta-Hydrolases 113 424 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3124g00023 Vium-Chr3124 212582 217373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3124g00023 1 433 Carbohydrate Esterase AT3G27320 72.523 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3124g00023 - - gmx:100809142 745.732