Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3124g00022 ATGCCGACCGTGGCGGTGAAACTCTACAGCGTCTTCTTTAAGTTTCTCCTAAAGAACCGTTTGCAGAACCAGATCCATGCCCCGTCCGAAGAATCCAACCAGTTCGGTGTTACGACCCGACCCGACGAGTCCGTCGCCGCCGCCAACCCCTCCTTCTCCGACGGCATCGCCACCAAAGATATCCACATCGATCCCGTGACCTCCCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCACTCTCTCCCGAACCCAAATCCAAAACTATCTACAAATCCGAACCTGGATCCGCGGGGAACCTTGAAACGGCGTCGTCGCGCGCGGTGCGGCGAAATAGCTACGAGCCCTCAGTGTTTACGCCGCGGGAGGAGACGAGGCGGAGCAGCGCCGGGGAGTACCGGGGGTACTTGCCGGCGGCGGACGGTCGCCGGAAAAAGTTACCGGTGGTGTTACAGTTCCACGGCGGGGGGTGGGTGAGCGGGAGCAATGATTCGGTAGCGAACGATATGTTCTGCCGGAGGATTGCGAAGCTCTGCGACGCGGTGGTGGTGGCGGTCGGCTACCGGCTGGCGCCGGAGAATCGGTTCCCGGCGGCGTTTGAGGACGGGGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCGGAGTGTAGTAAGTCGTTGGGAGGGAGGAAATTTGAGGGTCATCACAAGCATATTGTTGATTCTTTTGGAGCGTCAGTAGTTGAACCTTGGTTGGCTGCTCATGCAAATCCATCTAGATGTGTTCTTCTTGGTGTGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAAAGCTGTAGAAGCAGGTTCACTTCTGGACCCGGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTAGCATGGAAACTATTTCTACCAGAGGGGGAGTTTAGCCTAGACCATCCAGCTGCCAATCCCCTTGTCCCAGGCCAGGGACCTCCTTTAAAGCAGAGACCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGGGACCGTGCCATTGCATATTCAGAGGAGCTTAGGAAGGTAATTGCCCGCCTACCCTTGAACTCCTGGGGTAGGGAAATCATATGGAGGTTTAATCTATGA 1203 0.5478 MPTVAVKLYSVFFKFLLKNRLQNQIHAPSEESNQFGVTTRPDESVAAANPSFSDGIATKDIHIDPVTSLSVRIFLPDSALSPEPKSKTIYKSEPGSAGNLETASSRAVRRNSYEPSVFTPREETRRSSAGEYRGYLPAADGRRKKLPVVLQFHGGGWVSGSNDSVANDMFCRRIAKLCDAVVVAVGYRLAPENRFPAAFEDGVKVLNWLAKQANLAECSKSLGGRKFEGHHKHIVDSFGASVVEPWLAAHANPSRCVLLGVSCGANIADYVARKAVEAGSLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPAANPLVPGQGPPLKQRPPTLTVVAEHDWMRDRAIAYSEELRKVIARLPLNSWGREIIWRFNL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3124g00022 400 MobiDBLite consensus disorder prediction 31 46 - -
Vium3124g00022 400 SUPERFAMILY alpha/beta-Hydrolases 113 381 IPR029058 -
Vium3124g00022 400 PANTHER ARYLACETAMIDE DEACETYLASE 53 381 - -
Vium3124g00022 400 MobiDBLite consensus disorder prediction 31 51 - -
Vium3124g00022 400 MobiDBLite consensus disorder prediction 82 130 - -
Vium3124g00022 400 Pfam alpha/beta hydrolase fold 149 385 IPR013094 GO:0016787
Vium3124g00022 400 MobiDBLite consensus disorder prediction 92 112 - -
Vium3124g00022 400 Gene3D alpha/beta hydrolase 12 387 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3124g00022 Vium-Chr3124 212159 217373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3124g00022 1 387 Carbohydrate Esterase AT3G27320 69.849 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3124g00022 - - gmx:100809142 642.114